Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC073210.2-201ENST00000430369 194 ntBASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC097658.1-201ENST00000475555 843 ntBASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AL355802.2-201ENST00000402069 882 ntBASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC005332.8-201ENST00000622750 2735 ntBASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GUSBP6-202ENST00000438529 1198 ntBASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C2orf69P4-201ENST00000565394 541 ntBASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KRT17P1-201ENST00000399211 1546 ntBASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms