Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.73□□□□□ -1.49
THBS1P07996 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
THBS1P07996 RNU4-50P-201ENST00000364361 141 ntBASIC5.73□□□□□ -1.49
THBS1P07996 RN7SKP15-201ENST00000364742 309 ntBASIC5.73□□□□□ -1.49
THBS1P07996 RNA5SP485-201ENST00000365053 119 ntBASIC5.73□□□□□ -1.49
THBS1P07996 RNU6-434P-201ENST00000384376 107 ntBASIC5.73□□□□□ -1.49
THBS1P07996 Y_RNA.577-201ENST00000384794 101 ntBASIC5.73□□□□□ -1.49
THBS1P07996 SNORD70.1-201ENST00000391007 85 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC110754.1-201ENST00000399740 601 ntBASIC5.73□□□□□ -1.49
THBS1P07996 HMGB3P7-201ENST00000400214 611 ntBASIC5.73□□□□□ -1.49
THBS1P07996 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 ELOCP20-201ENST00000422460 345 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 RPL23AP38-201ENST00000423801 469 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC097713.2-201ENST00000430199 356 ntBASIC5.73□□□□□ -1.49
THBS1P07996 PPIAP10-201ENST00000438675 458 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC097359.1-201ENST00000447946 463 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC144530.1-201ENST00000452862 555 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC112187.1-201ENST00000455837 479 ntBASIC5.73□□□□□ -1.49
THBS1P07996 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 TRBVB-201ENST00000477100 408 ntBASIC5.73□□□□□ -1.49
THBS1P07996 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 TBCAP3-201ENST00000512475 312 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 RNU5B-3P-201ENST00000516601 115 ntBASIC5.73□□□□□ -1.49
THBS1P07996 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 DYNLL1P4-201ENST00000549314 266 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AL133153.1-201ENST00000557756 303 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC026826.3-201ENST00000561747 158 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 AC005341.1-201ENST00000571086 708 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.73□□□□□ -1.49
THBS1P07996 AC012368.3-201ENST00000604190 219 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AL138960.1-201ENST00000613838 513 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AL049794.2-201ENST00000616301 365 ntBASIC5.73□□□□□ -1.49
THBS1P07996 AC130454.1-201ENST00000622948 401 ntBASIC5.73□□□□□ -1.49
THBS1P07996 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
THBS1P07996 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.73□□□□□ -1.49
THBS1P07996 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
THBS1P07996 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.73□□□□□ -1.49
THBS1P07996 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
THBS1P07996 AC074029.4-201ENST00000624796 1859 ntBASIC5.73□□□□□ -1.49
THBS1P07996 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
THBS1P07996 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
THBS1P07996 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
THBS1P07996 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
THBS1P07996 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
THBS1P07996 GABPAP-201ENST00000419271 1356 ntBASIC5.72□□□□□ -1.49
THBS1P07996 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
THBS1P07996 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.72□□□□□ -1.49
THBS1P07996 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
THBS1P07996 RN7SKP162-201ENST00000363605 345 ntBASIC5.72□□□□□ -1.49
THBS1P07996 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.72□□□□□ -1.49
THBS1P07996 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
THBS1P07996 Y_RNA.462-201ENST00000384268 102 ntBASIC5.72□□□□□ -1.49
THBS1P07996 RNU6-393P-201ENST00000384475 107 ntBASIC5.72□□□□□ -1.49
THBS1P07996 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
THBS1P07996 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 AC234781.4-201ENST00000419384 244 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.72□□□□□ -1.49
THBS1P07996 AL645568.3-201ENST00000433683 316 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.72□□□□□ -1.49
THBS1P07996 RPL12P11-201ENST00000439970 501 ntBASIC5.72□□□□□ -1.49
THBS1P07996 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 TMSB4XP3-201ENST00000445144 114 ntBASIC5.72□□□□□ -1.49
THBS1P07996 COX4I1P2-201ENST00000447446 547 ntBASIC5.72□□□□□ -1.49
THBS1P07996 FCF1P4-201ENST00000448326 183 ntBASIC5.72□□□□□ -1.49
THBS1P07996 RPL23AP60-201ENST00000450011 454 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 RN7SL39P-201ENST00000462264 297 ntBASIC5.72□□□□□ -1.49
THBS1P07996 FTH1P2-201ENST00000466086 412 ntBASIC5.72□□□□□ -1.49
THBS1P07996 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.72□□□□□ -1.49
THBS1P07996 UBA52P7-201ENST00000486088 380 ntBASIC5.72□□□□□ -1.49
THBS1P07996 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.72□□□□□ -1.49
THBS1P07996 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 HMGN1P16-201ENST00000508308 283 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AC018797.1-201ENST00000510791 255 ntBASIC5.72□□□□□ -1.49
THBS1P07996 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 GAPDHP62-201ENST00000515313 990 ntBASIC5.72□□□□□ -1.49
THBS1P07996 RNU7-4P-201ENST00000516961 62 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AC060775.1-201ENST00000518241 520 ntBASIC5.72□□□□□ -1.49
THBS1P07996 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.72□□□□□ -1.49
THBS1P07996 RN7SL230P-201ENST00000580835 303 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms