RNA–Protein interactions for RNA: ENST00000445144.1

TMSB4XP3-201, Transcript of TMSB4X pseudogene 3, humanhuman

BASIC

Gene TMSB4XP3, Length 114 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMSB4XP3-201ENST00000445144 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
TMSB4XP3-201ENST00000445144 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
TMSB4XP3-201ENST00000445144 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
TMSB4XP3-201ENST00000445144 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
TMSB4XP3-201ENST00000445144 FOXD1Q16676 465 aa16.16■□□□□ 0.18
TMSB4XP3-201ENST00000445144 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
TMSB4XP3-201ENST00000445144 MSH5O43196 834 aa15.31■□□□□ 0.04
TMSB4XP3-201ENST00000445144 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
TMSB4XP3-201ENST00000445144 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
TMSB4XP3-201ENST00000445144 ADRA2BP18089 450 aa14.51□□□□□ -0.09
TMSB4XP3-201ENST00000445144 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
TMSB4XP3-201ENST00000445144 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
TMSB4XP3-201ENST00000445144 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
TMSB4XP3-201ENST00000445144 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
TMSB4XP3-201ENST00000445144 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
TMSB4XP3-201ENST00000445144 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
TMSB4XP3-201ENST00000445144 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
TMSB4XP3-201ENST00000445144 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
TMSB4XP3-201ENST00000445144 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
TMSB4XP3-201ENST00000445144 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
TMSB4XP3-201ENST00000445144 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
TMSB4XP3-201ENST00000445144 POTEHQ6S545 545 aa12.49□□□□□ -0.41
TMSB4XP3-201ENST00000445144 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
TMSB4XP3-201ENST00000445144 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
TMSB4XP3-201ENST00000445144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMSB4XP3-201ENST00000445144 DSG3P32926 999 aa11.99□□□□□ -0.49
TMSB4XP3-201ENST00000445144 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
TMSB4XP3-201ENST00000445144 U3KPZ7 1027 aaPredicted RBP11.88□□□□□ -0.51
TMSB4XP3-201ENST00000445144 CAPN15O75808 1086 aa11.85□□□□□ -0.51
TMSB4XP3-201ENST00000445144 NCBP3Q53F19 620 aaKnown RBP11.77□□□□□ -0.53
TMSB4XP3-201ENST00000445144 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
TMSB4XP3-201ENST00000445144 ABCB7O75027 752 aa11.56□□□□□ -0.56
TMSB4XP3-201ENST00000445144 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
TMSB4XP3-201ENST00000445144 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
TMSB4XP3-201ENST00000445144 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
TMSB4XP3-201ENST00000445144 SP7Q8TDD2 431 aaPredicted RBP11.39□□□□□ -0.59
TMSB4XP3-201ENST00000445144 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
TMSB4XP3-201ENST00000445144 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
TMSB4XP3-201ENST00000445144 APLP2Q06481 763 aa11.33□□□□□ -0.6
TMSB4XP3-201ENST00000445144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
TMSB4XP3-201ENST00000445144 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
TMSB4XP3-201ENST00000445144 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
TMSB4XP3-201ENST00000445144 POLA2Q14181 598 aa11.06□□□□□ -0.64
TMSB4XP3-201ENST00000445144 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
TMSB4XP3-201ENST00000445144 AKT1S1Q96B36 256 aa11.01□□□□□ -0.65
TMSB4XP3-201ENST00000445144 HAX1O00165 279 aa10.98□□□□□ -0.65
TMSB4XP3-201ENST00000445144 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
TMSB4XP3-201ENST00000445144 EVX2Q03828 476 aa10.9□□□□□ -0.66
TMSB4XP3-201ENST00000445144 KCNA4P22459 653 aa10.89□□□□□ -0.67
TMSB4XP3-201ENST00000445144 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMSB4XP3-201ENST00000445144 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
TMSB4XP3-201ENST00000445144 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
TMSB4XP3-201ENST00000445144 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
TMSB4XP3-201ENST00000445144 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
TMSB4XP3-201ENST00000445144 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
TMSB4XP3-201ENST00000445144 LHX8Q68G74 356 aa10.66□□□□□ -0.7
TMSB4XP3-201ENST00000445144 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
TMSB4XP3-201ENST00000445144 GABBR2O75899 941 aa10.55□□□□□ -0.72
TMSB4XP3-201ENST00000445144 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
TMSB4XP3-201ENST00000445144 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
TMSB4XP3-201ENST00000445144 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
TMSB4XP3-201ENST00000445144 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
TMSB4XP3-201ENST00000445144 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
TMSB4XP3-201ENST00000445144 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
TMSB4XP3-201ENST00000445144 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
TMSB4XP3-201ENST00000445144 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
TMSB4XP3-201ENST00000445144 FOXD4L1Q9NU39 408 aa10.32□□□□□ -0.76
TMSB4XP3-201ENST00000445144 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
TMSB4XP3-201ENST00000445144 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
TMSB4XP3-201ENST00000445144 FBLN2P98095 1184 aa10.18□□□□□ -0.78
TMSB4XP3-201ENST00000445144 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.78
TMSB4XP3-201ENST00000445144 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
TMSB4XP3-201ENST00000445144 ZNF692Q9BU19 519 aaPredicted RBP10.13□□□□□ -0.79
TMSB4XP3-201ENST00000445144 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
TMSB4XP3-201ENST00000445144 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
TMSB4XP3-201ENST00000445144 POTEMA6NI47 508 aa10.08□□□□□ -0.8
TMSB4XP3-201ENST00000445144 PRR29P0C7W0 189 aa10.08□□□□□ -0.8
TMSB4XP3-201ENST00000445144 CLCN6P51797 869 aa10.07□□□□□ -0.8
TMSB4XP3-201ENST00000445144 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
TMSB4XP3-201ENST00000445144 ZBTB22O15209 634 aa10.06□□□□□ -0.8
TMSB4XP3-201ENST00000445144 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
TMSB4XP3-201ENST00000445144 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
TMSB4XP3-201ENST00000445144 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
TMSB4XP3-201ENST00000445144 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
TMSB4XP3-201ENST00000445144 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
TMSB4XP3-201ENST00000445144 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
TMSB4XP3-201ENST00000445144 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
TMSB4XP3-201ENST00000445144 PCDH10Q9P2E7 1040 aa9.89□□□□□ -0.83
TMSB4XP3-201ENST00000445144 ZRANB1Q9UGI0 708 aa9.89□□□□□ -0.83
TMSB4XP3-201ENST00000445144 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
TMSB4XP3-201ENST00000445144 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
TMSB4XP3-201ENST00000445144 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
TMSB4XP3-201ENST00000445144 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
TMSB4XP3-201ENST00000445144 CREBZFQ9NS37 354 aa9.75□□□□□ -0.85
TMSB4XP3-201ENST00000445144 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
TMSB4XP3-201ENST00000445144 ASTLQ6HA08 431 aaPredicted RBP9.66□□□□□ -0.86
TMSB4XP3-201ENST00000445144 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
TMSB4XP3-201ENST00000445144 C7P10643 843 aa9.63□□□□□ -0.87
TMSB4XP3-201ENST00000445144 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
TMSB4XP3-201ENST00000445144 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms