Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 METTL21EP-201ENST00000298105 713 ntBASIC3.7□□□□□ -1.82
SSR1P43307 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 FRG1CP-201ENST00000358464 769 ntBASIC3.7□□□□□ -1.82
SSR1P43307 SNORD9-201ENST00000362566 104 ntBASIC3.7□□□□□ -1.82
SSR1P43307 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
SSR1P43307 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 AL359837.1-201ENST00000381357 287 ntBASIC3.7□□□□□ -1.82
SSR1P43307 SNORA26.7-201ENST00000391288 122 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AL583834.1-201ENST00000406943 343 ntBASIC3.7□□□□□ -1.82
SSR1P43307 MIR1193-201ENST00000408109 78 ntBASIC3.7□□□□□ -1.82
SSR1P43307 NUP35P2-201ENST00000416748 943 ntBASIC3.7□□□□□ -1.82
SSR1P43307 DBIP2-201ENST00000419076 262 ntBASIC3.7□□□□□ -1.82
SSR1P43307 SDCBPP2-201ENST00000424643 885 ntBASIC3.7□□□□□ -1.82
SSR1P43307 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.7□□□□□ -1.82
SSR1P43307 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.7□□□□□ -1.82
SSR1P43307 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.7□□□□□ -1.82
SSR1P43307 HMGB1P48-201ENST00000446155 598 ntBASIC3.7□□□□□ -1.82
SSR1P43307 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 RPL23AP15-201ENST00000450202 459 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 RPL7L1P13-201ENST00000511702 739 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC133963.2-201ENST00000513686 578 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.7□□□□□ -1.82
SSR1P43307 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 RNU6-579P-201ENST00000516879 102 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 AP000926.4-201ENST00000527351 454 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.7□□□□□ -1.82
SSR1P43307 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 AC084824.1-201ENST00000550917 1005 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.7□□□□□ -1.82
SSR1P43307 OR2BH1P-201ENST00000608850 864 ntBASIC3.7□□□□□ -1.82
SSR1P43307 AC068831.8-201ENST00000620171 435 ntBASIC3.7□□□□□ -1.82
SSR1P43307 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.7□□□□□ -1.82
SSR1P43307 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSR1P43307 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSR1P43307 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSR1P43307 RNU1-75P-201ENST00000347264 129 ntBASIC3.69□□□□□ -1.82
SSR1P43307 PRRC2CP1-201ENST00000404428 159 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 RPL7P10-201ENST00000417407 739 ntBASIC3.69□□□□□ -1.82
SSR1P43307 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 PNRC2P1-201ENST00000423940 420 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AC093151.1-201ENST00000427711 313 ntBASIC3.69□□□□□ -1.82
SSR1P43307 RPL36P19-201ENST00000430744 301 ntBASIC3.69□□□□□ -1.82
SSR1P43307 B3GNT2P1-201ENST00000434960 952 ntBASIC3.69□□□□□ -1.82
SSR1P43307 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.69□□□□□ -1.82
SSR1P43307 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.69□□□□□ -1.82
SSR1P43307 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.69□□□□□ -1.82
SSR1P43307 AC023598.1-201ENST00000472521 361 ntBASIC3.69□□□□□ -1.82
SSR1P43307 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSR1P43307 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 AC008565.1-201ENST00000509046 885 ntBASIC3.69□□□□□ -1.82
SSR1P43307 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 AP001636.2-201ENST00000525517 696 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.69□□□□□ -1.82
SSR1P43307 AC026333.2-201ENST00000542164 106 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AC011602.1-201ENST00000546484 331 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AL442163.2-201ENST00000553912 710 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.69□□□□□ -1.82
SSR1P43307 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 AC233266.2-201ENST00000567067 528 ntBASIC3.69□□□□□ -1.82
SSR1P43307 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.69□□□□□ -1.82
SSR1P43307 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.69□□□□□ -1.82
SSR1P43307 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.69□□□□□ -1.82
SSR1P43307 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.69□□□□□ -1.82
SSR1P43307 AC005972.3-201ENST00000606304 481 ntBASIC3.69□□□□□ -1.82
SSR1P43307 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.69□□□□□ -1.82
SSR1P43307 AC022149.2-201ENST00000621061 203 ntBASIC3.69□□□□□ -1.82
SSR1P43307 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SSR1P43307 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSR1P43307 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.69□□□□□ -1.82
SSR1P43307 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SSR1P43307 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SSR1P43307 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SSR1P43307 AL591034.1-201ENST00000407447 340 ntBASIC3.68□□□□□ -1.82
SSR1P43307 RNU6-1077P-201ENST00000410506 102 ntBASIC3.68□□□□□ -1.82
SSR1P43307 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms