RNA–Protein interactions for RNA: ENST00000519367.1

CHCHD7-209, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, humanhuman

TSL 3 BASIC

Gene CHCHD7, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7-209ENST00000519367 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
CHCHD7-209ENST00000519367 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
CHCHD7-209ENST00000519367 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
CHCHD7-209ENST00000519367 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
CHCHD7-209ENST00000519367 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
CHCHD7-209ENST00000519367 FOXD1Q16676 465 aa20.86■□□□□ 0.93
CHCHD7-209ENST00000519367 ADRA2BP18089 450 aa20.19■□□□□ 0.82
CHCHD7-209ENST00000519367 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
CHCHD7-209ENST00000519367 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
CHCHD7-209ENST00000519367 MSH5O43196 834 aa19.19■□□□□ 0.66
CHCHD7-209ENST00000519367 PPP4R3CPQ6ZMV5 832 aa18.69■□□□□ 0.58
CHCHD7-209ENST00000519367 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
CHCHD7-209ENST00000519367 KCNA4P22459 653 aa18.4■□□□□ 0.54
CHCHD7-209ENST00000519367 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
CHCHD7-209ENST00000519367 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
CHCHD7-209ENST00000519367 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
CHCHD7-209ENST00000519367 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
CHCHD7-209ENST00000519367 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
CHCHD7-209ENST00000519367 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
CHCHD7-209ENST00000519367 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
CHCHD7-209ENST00000519367 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
CHCHD7-209ENST00000519367 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
CHCHD7-209ENST00000519367 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
CHCHD7-209ENST00000519367 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
CHCHD7-209ENST00000519367 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
CHCHD7-209ENST00000519367 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
CHCHD7-209ENST00000519367 ZBTB22O15209 634 aa16.93■□□□□ 0.3
CHCHD7-209ENST00000519367 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
CHCHD7-209ENST00000519367 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
CHCHD7-209ENST00000519367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.295e-9■□□□□ 9.4
CHCHD7-209ENST00000519367 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
CHCHD7-209ENST00000519367 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
CHCHD7-209ENST00000519367 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
CHCHD7-209ENST00000519367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
CHCHD7-209ENST00000519367 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
CHCHD7-209ENST00000519367 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
CHCHD7-209ENST00000519367 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
CHCHD7-209ENST00000519367 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
CHCHD7-209ENST00000519367 APLP2Q06481 763 aa16.2■□□□□ 0.18
CHCHD7-209ENST00000519367 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
CHCHD7-209ENST00000519367 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
CHCHD7-209ENST00000519367 CAPN15O75808 1086 aa16.02■□□□□ 0.16
CHCHD7-209ENST00000519367 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
CHCHD7-209ENST00000519367 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
CHCHD7-209ENST00000519367 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
CHCHD7-209ENST00000519367 POLA2Q14181 598 aa15.74■□□□□ 0.11
CHCHD7-209ENST00000519367 ABCB7O75027 752 aa15.72■□□□□ 0.11
CHCHD7-209ENST00000519367 DSG3P32926 999 aa15.71■□□□□ 0.11
CHCHD7-209ENST00000519367 FBLN2P98095 1184 aa15.47■□□□□ 0.07
CHCHD7-209ENST00000519367 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
CHCHD7-209ENST00000519367 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
CHCHD7-209ENST00000519367 FKBP8Q14318 412 aa15.31■□□□□ 0.04
CHCHD7-209ENST00000519367 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
CHCHD7-209ENST00000519367 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
CHCHD7-209ENST00000519367 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
CHCHD7-209ENST00000519367 SPDYE6P0CI01 402 aa15.06■□□□□ 0
CHCHD7-209ENST00000519367 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
CHCHD7-209ENST00000519367 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
CHCHD7-209ENST00000519367 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
CHCHD7-209ENST00000519367 SSUH2Q9Y2M2 353 aa14.95□□□□□ -0.02
CHCHD7-209ENST00000519367 PROM2Q8N271 834 aa14.91□□□□□ -0.02
CHCHD7-209ENST00000519367 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHCHD7-209ENST00000519367 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
CHCHD7-209ENST00000519367 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
CHCHD7-209ENST00000519367 REM2Q8IYK8 340 aaPredicted RBP14.67□□□□□ -0.06
CHCHD7-209ENST00000519367 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
CHCHD7-209ENST00000519367 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
CHCHD7-209ENST00000519367 CLEC11AQ9Y240 323 aa14.55□□□□□ -0.08
CHCHD7-209ENST00000519367 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
CHCHD7-209ENST00000519367 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
CHCHD7-209ENST00000519367 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
CHCHD7-209ENST00000519367 MIER1Q8N108 512 aa14.4□□□□□ -0.1
CHCHD7-209ENST00000519367 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
CHCHD7-209ENST00000519367 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
CHCHD7-209ENST00000519367 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
CHCHD7-209ENST00000519367 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
CHCHD7-209ENST00000519367 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
CHCHD7-209ENST00000519367 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
CHCHD7-209ENST00000519367 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
CHCHD7-209ENST00000519367 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHCHD7-209ENST00000519367 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
CHCHD7-209ENST00000519367 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
CHCHD7-209ENST00000519367 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
CHCHD7-209ENST00000519367 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
CHCHD7-209ENST00000519367 PIP4P2Q8N4L2 257 aa14.14□□□□□ -0.15
CHCHD7-209ENST00000519367 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
CHCHD7-209ENST00000519367 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
CHCHD7-209ENST00000519367 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
CHCHD7-209ENST00000519367 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHCHD7-209ENST00000519367 NUBP1P53384 320 aa13.99□□□□□ -0.17
CHCHD7-209ENST00000519367 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
CHCHD7-209ENST00000519367 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
CHCHD7-209ENST00000519367 PKD2Q13563 968 aa13.9□□□□□ -0.18
CHCHD7-209ENST00000519367 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
CHCHD7-209ENST00000519367 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
CHCHD7-209ENST00000519367 GSE1Q14687 1217 aa13.87□□□□□ -0.19
CHCHD7-209ENST00000519367 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
CHCHD7-209ENST00000519367 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
CHCHD7-209ENST00000519367 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
CHCHD7-209ENST00000519367 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms