Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Z99127.2-201ENST00000441426 334 ntBASIC1.67□□□□□ -2.14
APOBP04114 DNAJC19P1-201ENST00000455312 319 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC116337.1-201ENST00000509680 687 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 AP001317.1-201ENST00000531194 960 ntBASIC1.67□□□□□ -2.14
APOBP04114 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.67□□□□□ -2.14
APOBP04114 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 SNORA64-201ENST00000384674 134 ntBASIC1.67□□□□□ -2.14
APOBP04114 RNA5SP508-201ENST00000411327 119 ntBASIC1.67□□□□□ -2.14
APOBP04114 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 RPL29P29-201ENST00000448725 423 ntBASIC1.67□□□□□ -2.14
APOBP04114 MIR4498-201ENST00000577599 66 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC022884.3-201ENST00000579571 248 ntBASIC1.67□□□□□ -2.14
APOBP04114 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
APOBP04114 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
APOBP04114 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.67□□□□□ -2.14
APOBP04114 RAD1P1-201ENST00000231383 813 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.67□□□□□ -2.14
APOBP04114 OR2B8P-201ENST00000432841 938 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC010881.1-201ENST00000433830 235 ntBASIC1.67□□□□□ -2.14
APOBP04114 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 AC234781.5-201ENST00000508429 271 ntBASIC1.67□□□□□ -2.14
APOBP04114 SCARNA17.1-201ENST00000516211 143 ntBASIC1.67□□□□□ -2.14
APOBP04114 SCARNA17.2-201ENST00000516334 143 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.67□□□□□ -2.14
APOBP04114 AC078814.3-201ENST00000553036 491 ntBASIC1.67□□□□□ -2.14
APOBP04114 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 SCARNA17.4-201ENST00000614296 143 ntBASIC1.67□□□□□ -2.14
APOBP04114 CTSLP2-204ENST00000629029 392 ntBASIC1.67□□□□□ -2.14
APOBP04114 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 Y_RNA.508-201ENST00000384502 114 ntBASIC1.66□□□□□ -2.14
APOBP04114 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
APOBP04114 CYCSP45-201ENST00000402289 315 ntBASIC1.66□□□□□ -2.14
APOBP04114 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.66□□□□□ -2.14
APOBP04114 HIGD1AP2-201ENST00000446367 280 ntBASIC1.66□□□□□ -2.14
APOBP04114 TRBV1-201ENST00000476502 284 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC093278.1-201ENST00000494700 600 ntBASIC1.66□□□□□ -2.14
APOBP04114 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 OR4G1P-202ENST00000641173 1788 ntBASIC1.66□□□□□ -2.14
APOBP04114 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
APOBP04114 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
APOBP04114 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
APOBP04114 HMGB3P11-201ENST00000440127 604 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 RPL7P52-201ENST00000449200 742 ntBASIC1.66□□□□□ -2.14
APOBP04114 MTCYBP14-201ENST00000457471 715 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.66□□□□□ -2.14
APOBP04114 RNU6-548P-201ENST00000517083 115 ntBASIC1.66□□□□□ -2.14
APOBP04114 RPL7P20-201ENST00000520308 745 ntBASIC1.66□□□□□ -2.14
APOBP04114 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AP002770.2-201ENST00000543613 532 ntBASIC1.66□□□□□ -2.14
APOBP04114 BNIP3P8-201ENST00000597863 560 ntBASIC1.66□□□□□ -2.14
APOBP04114 GTF2H2B-203ENST00000508065 1432 ntBASIC1.66□□□□□ -2.14
APOBP04114 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
APOBP04114 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.66□□□□□ -2.14
APOBP04114 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
APOBP04114 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.66□□□□□ -2.14
APOBP04114 DPH3P2-201ENST00000422618 250 ntBASIC1.66□□□□□ -2.14
APOBP04114 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.66□□□□□ -2.14
APOBP04114 AC009263.1-201ENST00000441193 1239 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 SYT14P1-202ENST00000600441 1448 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC007938.3-201ENST00000604965 623 ntBASIC1.66□□□□□ -2.14
APOBP04114 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
APOBP04114 VDAC1P3-201ENST00000434069 851 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC112220.1-201ENST00000434628 355 ntBASIC1.66□□□□□ -2.14
APOBP04114 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AC021146.1-201ENST00000511202 716 ntBASIC1.66□□□□□ -2.14
APOBP04114 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.66□□□□□ -2.14
APOBP04114 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.66□□□□□ -2.14
APOBP04114 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
APOBP04114 AC009487.4-201ENST00000624969 3585 ntBASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms