Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 EBF3-202ENST00000368648 4375 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC097382.2-201ENST00000500031 4300 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 THAP5-203ENST00000415914 3306 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC118273.1-201ENST00000525324 3006 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AL136087.1-201ENST00000305491 426 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SNORA1B-201ENST00000362535 133 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SNORA22.1-201ENST00000362701 134 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 Y_RNA.207-201ENST00000364142 106 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RN7SKP69-201ENST00000365390 305 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SNORA51.8-201ENST00000384234 132 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SNORA75.1-201ENST00000391130 148 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 COX6A1P3-201ENST00000404167 293 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RNU2-18P-201ENST00000411224 162 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC079834.1-201ENST00000414016 421 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AL356387.2-201ENST00000422272 243 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 PGAM1P6-201ENST00000425684 747 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 BX276092.1-201ENST00000427368 251 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC073188.1-201ENST00000442493 361 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IGHV5-78-201ENST00000450948 295 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC006455.3-201ENST00000454641 333 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC104451.1-201ENST00000458010 176 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RNU7-119P-201ENST00000459279 63 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RNU7-96P-201ENST00000459535 64 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RNU6-221P-201ENST00000459541 99 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RN7SL430P-201ENST00000464176 242 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 CTNNA2-214ENST00000496558 3839 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 TECRP1-201ENST00000513307 445 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RN7SKP234-201ENST00000517173 224 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IGKV2-14-201ENST00000517571 347 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IGLV3-13-201ENST00000518475 223 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC009901.2-201ENST00000521595 240 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC009120.3-201ENST00000563335 499 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MIR4269-201ENST00000578705 84 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MIR3152-201ENST00000579801 74 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 FKBP1AP1-201ENST00000594588 318 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 RN7SL620P-201ENST00000610816 303 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 Metazoa_SRP.197-201ENST00000618956 303 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC005086.4-201ENST00000623065 213 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SNORD3E-202ENST00000627253 216 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IFT122-205ENST00000431818 4414 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 STAG3-218ENST00000615138 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC018647.2-201ENST00000605778 4200 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AL356599.1-205ENST00000606388 3961 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC008264.2-201ENST00000610193 3731 ntBASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP9-4Q9BYQ2 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms