RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 AEBP2Q6ZN18 517 aaPredicted RBP9.65□□□□□ -0.86
SNORD3E-202ENST00000627253 CHIC1Q5VXU3 224 aa9□□□□□ -0.97
SNORD3E-202ENST00000627253 SENP3Q9H4L4 574 aaPredicted RBP8.05□□□□□ -1.12
SNORD3E-202ENST00000627253 PHF23Q9BUL5 403 aaPredicted RBP8.01□□□□□ -1.13
SNORD3E-202ENST00000627253 FOXD1Q16676 465 aa7.64□□□□□ -1.19
SNORD3E-202ENST00000627253 PPP6R1Q9UPN7 881 aa7.16□□□□□ -1.26
SNORD3E-202ENST00000627253 PLPPR3Q6T4P5 718 aa7.08□□□□□ -1.28
SNORD3E-202ENST00000627253 POTEDQ86YR6 584 aa7.08□□□□□ -1.28
SNORD3E-202ENST00000627253 ADRA2BP18089 450 aa7.07□□□□□ -1.28
SNORD3E-202ENST00000627253 MSH5O43196 834 aa7.02□□□□□ -1.29
SNORD3E-202ENST00000627253 PIAS4Q8N2W9 510 aaPredicted RBP7.02□□□□□ -1.29
SNORD3E-202ENST00000627253 MAPK8IP2Q13387 824 aaPredicted RBP6.54□□□□□ -1.36
SNORD3E-202ENST00000627253 DMRT2Q9Y5R5 561 aa6.44□□□□□ -1.38
SNORD3E-202ENST00000627253 SCAF1Q9H7N4 1312 aaKnown RBP6.26□□□□□ -1.41
SNORD3E-202ENST00000627253 PPP4R3CPQ6ZMV5 832 aa6.25□□□□□ -1.41
SNORD3E-202ENST00000627253 HOXD11P31277 338 aaPredicted RBP6.2□□□□□ -1.42
SNORD3E-202ENST00000627253 CNKSR2Q8WXI2 1034 aa6.11□□□□□ -1.43
SNORD3E-202ENST00000627253 RNF216Q9NWF9 866 aaPredicted RBP6.09□□□□□ -1.43
SNORD3E-202ENST00000627253 RNF39Q9H2S5 420 aa6.08□□□□□ -1.44
SNORD3E-202ENST00000627253 DCAF8L1A6NGE4 600 aa6.06□□□□□ -1.44
SNORD3E-202ENST00000627253 CACNB1Q02641 598 aaPredicted RBP6.06□□□□□ -1.44
SNORD3E-202ENST00000627253 NPM3O75607 178 aaKnown RBP5.94□□□□□ -1.46
SNORD3E-202ENST00000627253 DNAJC5BQ9UF47 199 aa5.93□□□□□ -1.46
SNORD3E-202ENST00000627253 C1QBPQ07021 282 aaKnown RBP5.91□□□□□ -1.46
SNORD3E-202ENST00000627253 NCBP3Q53F19 620 aaKnown RBP5.86□□□□□ -1.47
SNORD3E-202ENST00000627253 KCNA4P22459 653 aa5.8□□□□□ -1.48
SNORD3E-202ENST00000627253 U3KPZ7 1027 aaPredicted RBP5.8□□□□□ -1.48
SNORD3E-202ENST00000627253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.78□□□□□ -1.48
SNORD3E-202ENST00000627253 SLC4A2P04920 1241 aa5.75□□□□□ -1.49
SNORD3E-202ENST00000627253 SPINK5Q9NQ38 1064 aaPredicted RBP5.73□□□□□ -1.49
SNORD3E-202ENST00000627253 DSG3P32926 999 aa5.68□□□□□ -1.5
SNORD3E-202ENST00000627253 CAPN15O75808 1086 aa5.6□□□□□ -1.51
SNORD3E-202ENST00000627253 ABCB7O75027 752 aa5.53□□□□□ -1.52
SNORD3E-202ENST00000627253 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
SNORD3E-202ENST00000627253 POTEHQ6S545 545 aa5.49□□□□□ -1.53
SNORD3E-202ENST00000627253 ZNF219Q9P2Y4 722 aaPredicted RBP5.47□□□□□ -1.53
SNORD3E-202ENST00000627253 ATF5Q9Y2D1 282 aaPredicted RBP5.46□□□□□ -1.54
SNORD3E-202ENST00000627253 SAMD1Q6SPF0 538 aaPredicted RBP5.42□□□□□ -1.54
SNORD3E-202ENST00000627253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 ZBTB22O15209 634 aa5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 MYCNP04198 464 aaPredicted RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 HNRNPUL2Q1KMD3 747 aaKnown RBP5.41□□□□□ -1.54
SNORD3E-202ENST00000627253 POLA2Q14181 598 aa5.38□□□□□ -1.55
SNORD3E-202ENST00000627253 APLP2Q06481 763 aa5.37□□□□□ -1.55
SNORD3E-202ENST00000627253 SLC4A1APQ9BWU0 796 aaKnown RBP5.37□□□□□ -1.55
SNORD3E-202ENST00000627253 FOXD4L1Q9NU39 408 aa5.34□□□□□ -1.55
SNORD3E-202ENST00000627253 CHRDL2Q6WN34 429 aa5.27□□□□□ -1.57
SNORD3E-202ENST00000627253 RBM42Q9BTD8 480 aaKnown RBP5.27□□□□□ -1.57
SNORD3E-202ENST00000627253 OSCARQ8IYS5 282 aa5.25□□□□□ -1.57
SNORD3E-202ENST00000627253 REM2Q8IYK8 340 aaPredicted RBP5.21□□□□□ -1.58
SNORD3E-202ENST00000627253 AKT1S1Q96B36 256 aa5.2□□□□□ -1.58
SNORD3E-202ENST00000627253 MKRN4PQ13434 485 aaPredicted RBP5.18□□□□□ -1.58
SNORD3E-202ENST00000627253 PIP4P2Q8N4L2 257 aa5.18□□□□□ -1.58
SNORD3E-202ENST00000627253 PITPNM1O00562 1244 aa5.17□□□□□ -1.58
SNORD3E-202ENST00000627253 ATXN8OSP0DMR3 200 aa5.16□□□□□ -1.58
SNORD3E-202ENST00000627253 ZBTB12Q9Y330 459 aaPredicted RBP5.15□□□□□ -1.59
SNORD3E-202ENST00000627253 FXR2P51116 673 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNORD3E-202ENST00000627253 EVX2Q03828 476 aa5.13□□□□□ -1.59
SNORD3E-202ENST00000627253 SP7Q8TDD2 431 aaPredicted RBP5.11□□□□□ -1.59
SNORD3E-202ENST00000627253 SSUH2Q9Y2M2 353 aa5.07□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE2BA6NHP3 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE6P0CI01 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 SPDYE2Q495Y8 402 aa5.06□□□□□ -1.6
SNORD3E-202ENST00000627253 CSRNP3Q8WYN3 585 aa5.05□□□□□ -1.6
SNORD3E-202ENST00000627253 HAX1O00165 279 aa5.01□□□□□ -1.61
SNORD3E-202ENST00000627253 FBLN2P98095 1184 aa5.01□□□□□ -1.61
SNORD3E-202ENST00000627253 PRKAR2AP13861 404 aaKnown RBP4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 EHMT2Q96KQ7 1210 aa4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 ZNF692Q9BU19 519 aaPredicted RBP4.98□□□□□ -1.61
SNORD3E-202ENST00000627253 C19orf67A6NJJ6 358 aa4.97□□□□□ -1.61
SNORD3E-202ENST00000627253 CHADLQ6NUI6 762 aa4.97□□□□□ -1.61
SNORD3E-202ENST00000627253 SPDYE1Q8NFV5 336 aaPredicted RBP4.96□□□□□ -1.62
SNORD3E-202ENST00000627253 CLEC11AQ9Y240 323 aa4.96□□□□□ -1.62
SNORD3E-202ENST00000627253 PABPN1Q86U42 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
SNORD3E-202ENST00000627253 GABBR2O75899 941 aa4.9□□□□□ -1.63
SNORD3E-202ENST00000627253 POTEIP0CG38 1075 aa4.9□□□□□ -1.63
SNORD3E-202ENST00000627253 PRR29P0C7W0 189 aa4.86□□□□□ -1.63
SNORD3E-202ENST00000627253 CREBZFQ9NS37 354 aa4.85□□□□□ -1.63
SNORD3E-202ENST00000627253 FARP1Q9Y4F1 1045 aaPredicted RBP4.85□□□□□ -1.63
SNORD3E-202ENST00000627253 CD44P16070 742 aaKnown RBP4.82□□□□□ -1.64
SNORD3E-202ENST00000627253 MNX1P50219 401 aaPredicted RBP4.81□□□□□ -1.64
SNORD3E-202ENST00000627253 SPDYE4A6NLX3 237 aa4.78□□□□□ -1.64
SNORD3E-202ENST00000627253 LHX8Q68G74 356 aa4.78□□□□□ -1.64
SNORD3E-202ENST00000627253 PROM2Q8N271 834 aa4.77□□□□□ -1.65
SNORD3E-202ENST00000627253 ZNF579Q8NAF0 562 aaKnown RBP4.77□□□□□ -1.65
SNORD3E-202ENST00000627253 GALR2O43603 387 aaPredicted RBP4.76□□□□□ -1.65
SNORD3E-202ENST00000627253 POTEB2H3BUK9 544 aa4.74□□□□□ -1.65
SNORD3E-202ENST00000627253 PHF12Q96QT6 1004 aa4.73□□□□□ -1.65
SNORD3E-202ENST00000627253 ZRANB1Q9UGI0 708 aa4.73□□□□□ -1.65
SNORD3E-202ENST00000627253 PELP1Q8IZL8 1130 aaKnown RBP4.72□□□□□ -1.65
SNORD3E-202ENST00000627253 POTEJP0CG39 1038 aa4.69□□□□□ -1.66
SNORD3E-202ENST00000627253 STAG3Q9UJ98 1225 aa4.69□□□□□ -1.66
SNORD3E-202ENST00000627253 OTUD5Q96G74 571 aa4.68□□□□□ -1.66
SNORD3E-202ENST00000627253 CLCN6P51797 869 aa4.66□□□□□ -1.66
SNORD3E-202ENST00000627253 MS4A3Q96HJ5 214 aa4.66□□□□□ -1.66
SNORD3E-202ENST00000627253 TRPC6Q9Y210 931 aa4.65□□□□□ -1.67
SNORD3E-202ENST00000627253 CCDC61Q9Y6R9 512 aa4.65□□□□□ -1.67
SNORD3E-202ENST00000627253 DCBLD2Q96PD2 775 aa4.64□□□□□ -1.67
SNORD3E-202ENST00000627253 PLSCR2Q9NRY7 297 aa4.64□□□□□ -1.67
SNORD3E-202ENST00000627253 POTEFA5A3E0 1075 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms