Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC006548.1-201ENST00000427470 102 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AL445687.2-201ENST00000458156 728 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC092324.1-201ENST00000468671 324 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 OR51K1P-201ENST00000510214 950 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RNU6-273P-201ENST00000516937 96 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 SCARNA16.4-201ENST00000516956 187 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 RNU6-410P-201ENST00000517006 107 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC109635.4-202ENST00000531666 412 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC124068.1-201ENST00000563131 678 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AP001029.3-201ENST00000588063 596 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AL022099.1-201ENST00000604551 712 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 ATP1B3P1-201ENST00000605365 821 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC098479.1-201ENST00000609225 154 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 NLRP3P1-201ENST00000622303 1785 ntBASIC6.99□□□□□ -1.29
RC3H1Q5TC82 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RC3H1Q5TC82 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 CDC27P3-201ENST00000635418 1910 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 Y_RNA.80-201ENST00000362996 102 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 SNORD1C-201ENST00000363315 78 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RNU4-66P-201ENST00000365199 138 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 OR52E6-202ENST00000379946 954 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RNA5SP487-201ENST00000410186 122 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC078974.1-201ENST00000411597 223 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AF228730.2-201ENST00000438784 848 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RPS11P7-201ENST00000442125 465 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AL161722.1-201ENST00000446972 1032 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RNU7-66P-201ENST00000459469 62 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RPS20P21-201ENST00000466859 343 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC128716.1-201ENST00000475129 166 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 RPL22P13-201ENST00000493291 347 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC004062.1-201ENST00000509926 645 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC022882.1-201ENST00000532142 501 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 SS18L2P2-201ENST00000583960 235 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC091953.3-201ENST00000623220 236 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 CYP4F35P-202ENST00000636121 390 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 OR52H1-202ENST00000641796 1061 ntBASIC6.98□□□□□ -1.29
RC3H1Q5TC82 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
RC3H1Q5TC82 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 RNU6-1109P-201ENST00000391187 107 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SOD2P1-201ENST00000396543 562 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SSXP10-201ENST00000402595 565 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 HMGB1P17-201ENST00000403495 628 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 FAR2P2-201ENST00000413041 594 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC080125.1-201ENST00000414888 684 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 FAR2P4-202ENST00000425399 584 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms