Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC012020.1-201ENST00000624541 1728 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RNU6-462P-201ENST00000362659 105 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RNU4-21P-201ENST00000362802 126 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RNU6-660P-201ENST00000364566 109 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RN7SKP27-201ENST00000410684 333 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 MRPS10P2-201ENST00000431226 381 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL121601.2-201ENST00000438019 707 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL671855.1-201ENST00000446875 1203 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC097493.1-201ENST00000463958 372 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC087879.1-201ENST00000474343 374 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC104763.1-201ENST00000475274 360 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RN7SL41P-201ENST00000476144 297 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC116337.2-201ENST00000477662 156 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RPL36AP41-201ENST00000493820 306 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC006499.5-201ENST00000505037 514 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC091965.2-201ENST00000512324 613 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 HMGB1P19-201ENST00000517578 577 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC087276.1-201ENST00000529659 480 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 LSM6P2-201ENST00000552208 177 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC068831.4-201ENST00000556118 109 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC136618.2-201ENST00000575091 400 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 MIR4504-201ENST00000577413 92 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL356055.1-201ENST00000602528 446 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC090948.1-201ENST00000607464 549 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC012360.2-201ENST00000609349 391 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC078899.5-201ENST00000612475 178 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AL008636.1-201ENST00000625038 1018 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 MTND5P28-201ENST00000438005 1594 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC022893.2-201ENST00000564832 3296 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 AC025031.4-201ENST00000621248 3271 ntBASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC187A0A096LP49 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 OR4G11P-202ENST00000642116 1414 ntBASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 AC125257.1-201ENST00000560400 2930 ntBASIC4.46□□□□□ -1.69
CCDC187A0A096LP49 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 U3.4-201ENST00000363352 213 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 Y_RNA.553-201ENST00000384670 102 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 SNORA57.1-201ENST00000391227 145 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 MIR1271-201ENST00000408537 86 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 RN7SKP16-201ENST00000410180 299 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 RN7SKP263-201ENST00000411194 309 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 FCF1P9-201ENST00000412546 282 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 AC013429.2-201ENST00000418798 781 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 AL356387.2-201ENST00000422272 243 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 AL049610.1-201ENST00000423374 372 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 CBX1P1-201ENST00000440184 427 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 AL357520.1-201ENST00000441557 453 ntBASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC187A0A096LP49 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms