RNA–Protein interactions for RNA: ENST00000363352.2

U3.4-201, humanhuman

BASIC

Gene U3, Length 213 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.4-201ENST00000363352 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
U3.4-201ENST00000363352 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
U3.4-201ENST00000363352 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
U3.4-201ENST00000363352 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
U3.4-201ENST00000363352 FOXD1Q16676 465 aa18.61■□□□□ 0.57
U3.4-201ENST00000363352 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
U3.4-201ENST00000363352 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
U3.4-201ENST00000363352 ADRA2BP18089 450 aa17.73■□□□□ 0.43
U3.4-201ENST00000363352 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
U3.4-201ENST00000363352 MSH5O43196 834 aa17.31■□□□□ 0.36
U3.4-201ENST00000363352 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
U3.4-201ENST00000363352 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
U3.4-201ENST00000363352 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
U3.4-201ENST00000363352 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
U3.4-201ENST00000363352 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
U3.4-201ENST00000363352 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
U3.4-201ENST00000363352 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
U3.4-201ENST00000363352 KCNA4P22459 653 aa15.63■□□□□ 0.09
U3.4-201ENST00000363352 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
U3.4-201ENST00000363352 HOXD11P31277 338 aaPredicted RBP15.59■□□□□ 0.09
U3.4-201ENST00000363352 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
U3.4-201ENST00000363352 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
U3.4-201ENST00000363352 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
U3.4-201ENST00000363352 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
U3.4-201ENST00000363352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
U3.4-201ENST00000363352 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
U3.4-201ENST00000363352 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
U3.4-201ENST00000363352 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
U3.4-201ENST00000363352 U3KPZ7 1027 aaPredicted RBP14.56□□□□□ -0.08
U3.4-201ENST00000363352 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
U3.4-201ENST00000363352 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
U3.4-201ENST00000363352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
U3.4-201ENST00000363352 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
U3.4-201ENST00000363352 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
U3.4-201ENST00000363352 ZBTB22O15209 634 aa14.34□□□□□ -0.11
U3.4-201ENST00000363352 APLP2Q06481 763 aa14.32□□□□□ -0.12
U3.4-201ENST00000363352 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
U3.4-201ENST00000363352 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
U3.4-201ENST00000363352 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
U3.4-201ENST00000363352 CAPN15O75808 1086 aa14.19□□□□□ -0.14
U3.4-201ENST00000363352 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
U3.4-201ENST00000363352 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
U3.4-201ENST00000363352 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
U3.4-201ENST00000363352 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
U3.4-201ENST00000363352 DSG3P32926 999 aa13.99□□□□□ -0.17
U3.4-201ENST00000363352 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
U3.4-201ENST00000363352 ABCB7O75027 752 aa13.87□□□□□ -0.19
U3.4-201ENST00000363352 POLA2Q14181 598 aa13.81□□□□□ -0.2
U3.4-201ENST00000363352 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
U3.4-201ENST00000363352 FBLN2P98095 1184 aa13.48□□□□□ -0.25
U3.4-201ENST00000363352 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
U3.4-201ENST00000363352 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
U3.4-201ENST00000363352 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
U3.4-201ENST00000363352 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
U3.4-201ENST00000363352 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
U3.4-201ENST00000363352 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
U3.4-201ENST00000363352 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
U3.4-201ENST00000363352 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
U3.4-201ENST00000363352 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
U3.4-201ENST00000363352 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
U3.4-201ENST00000363352 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
U3.4-201ENST00000363352 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
U3.4-201ENST00000363352 SPDYE1Q8NFV5 336 aaPredicted RBP12.88□□□□□ -0.35
U3.4-201ENST00000363352 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
U3.4-201ENST00000363352 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
U3.4-201ENST00000363352 FKBP8Q14318 412 aa12.81□□□□□ -0.36
U3.4-201ENST00000363352 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
U3.4-201ENST00000363352 PROM2Q8N271 834 aa12.74□□□□□ -0.37
U3.4-201ENST00000363352 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
U3.4-201ENST00000363352 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
U3.4-201ENST00000363352 POTEHQ6S545 545 aa12.68□□□□□ -0.38
U3.4-201ENST00000363352 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
U3.4-201ENST00000363352 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
U3.4-201ENST00000363352 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
U3.4-201ENST00000363352 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
U3.4-201ENST00000363352 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
U3.4-201ENST00000363352 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
U3.4-201ENST00000363352 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
U3.4-201ENST00000363352 MIER1Q8N108 512 aa12.38□□□□□ -0.43
U3.4-201ENST00000363352 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
U3.4-201ENST00000363352 HAX1O00165 279 aa12.33□□□□□ -0.44
U3.4-201ENST00000363352 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
U3.4-201ENST00000363352 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
U3.4-201ENST00000363352 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
U3.4-201ENST00000363352 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
U3.4-201ENST00000363352 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
U3.4-201ENST00000363352 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
U3.4-201ENST00000363352 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
U3.4-201ENST00000363352 EVX2Q03828 476 aa12.14□□□□□ -0.47
U3.4-201ENST00000363352 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
U3.4-201ENST00000363352 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
U3.4-201ENST00000363352 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
U3.4-201ENST00000363352 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
U3.4-201ENST00000363352 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
U3.4-201ENST00000363352 NUBP1P53384 320 aa12.04□□□□□ -0.48
U3.4-201ENST00000363352 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
U3.4-201ENST00000363352 CLCN6P51797 869 aa12.01□□□□□ -0.49
U3.4-201ENST00000363352 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
U3.4-201ENST00000363352 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
U3.4-201ENST00000363352 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms