Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
DNMT3BQ9UBC3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
DNMT3BQ9UBC3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
DNMT3BQ9UBC3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC104118.1-201ENST00000607625 1589 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC008033.1-201ENST00000216407 1162 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 OR5P1P-201ENST00000299512 925 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 U3.4-201ENST00000363352 213 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 RNU6-660P-201ENST00000364566 109 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 RNU6-921P-201ENST00000384361 107 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SNORA37-201ENST00000384504 129 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 Y_RNA.559-201ENST00000384686 107 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SNRPEP2-201ENST00000397592 279 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AP000936.2-201ENST00000447151 681 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 MTCO3P2-201ENST00000457365 171 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 RNU6-956P-201ENST00000458868 103 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC092757.1-201ENST00000467293 467 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 UQCRHP4-201ENST00000471686 272 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC007537.2-201ENST00000472093 511 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 DEFB109F-201ENST00000491870 277 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 FTH1P24-201ENST00000503502 462 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC026412.2-201ENST00000512270 1075 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AP003033.1-201ENST00000527244 415 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC074029.1-201ENST00000552531 1044 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC018552.3-201ENST00000567416 561 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SNORD39.3-201ENST00000584451 71 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC008759.1-201ENST00000589783 983 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 VN1R85P-201ENST00000601587 426 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AL031775.1-201ENST00000607014 887 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SNORD91B-202ENST00000608459 222 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AL391497.1-201ENST00000608671 547 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC103591.3-201ENST00000608684 209 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC024941.1-201ENST00000612250 334 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC018816.2-201ENST00000621460 353 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC009878.1-201ENST00000621819 340 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 AC092656.1-203ENST00000624134 423 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 CPHL1P-201ENST00000461341 3407 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 SAMMSON-213ENST00000641336 1521 ntBASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.71□□□□□ -1.66
DNMT3BQ9UBC3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 LINC01109-201ENST00000603837 3081 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RNU4-21P-201ENST00000362802 126 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RNU6-984P-201ENST00000363236 109 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RNA5SP391-201ENST00000363456 119 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RNU1-132P-201ENST00000364300 164 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RNU6-441P-201ENST00000384545 106 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 Y_RNA.553-201ENST00000384670 102 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 RN7SKP142-201ENST00000411236 328 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.7□□□□□ -1.66
DNMT3BQ9UBC3 AC083875.1-201ENST00000419509 405 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms