RNA–Protein interactions for RNA: ENST00000458868.1

RNU6-956P-201, Transcript of RNA, U6 small nuclear 956, pseudogene, humanhuman

BASIC

Gene RNU6-956P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-956P-201ENST00000458868 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
RNU6-956P-201ENST00000458868 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
RNU6-956P-201ENST00000458868 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
RNU6-956P-201ENST00000458868 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
RNU6-956P-201ENST00000458868 FOXD1Q16676 465 aa19.15■□□□□ 0.66
RNU6-956P-201ENST00000458868 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
RNU6-956P-201ENST00000458868 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
RNU6-956P-201ENST00000458868 ADRA2BP18089 450 aa18.19■□□□□ 0.5
RNU6-956P-201ENST00000458868 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
RNU6-956P-201ENST00000458868 MSH5O43196 834 aa17.77■□□□□ 0.44
RNU6-956P-201ENST00000458868 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
RNU6-956P-201ENST00000458868 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
RNU6-956P-201ENST00000458868 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
RNU6-956P-201ENST00000458868 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
RNU6-956P-201ENST00000458868 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
RNU6-956P-201ENST00000458868 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
RNU6-956P-201ENST00000458868 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
RNU6-956P-201ENST00000458868 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
RNU6-956P-201ENST00000458868 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
RNU6-956P-201ENST00000458868 KCNA4P22459 653 aa15.97■□□□□ 0.15
RNU6-956P-201ENST00000458868 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
RNU6-956P-201ENST00000458868 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
RNU6-956P-201ENST00000458868 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
RNU6-956P-201ENST00000458868 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
RNU6-956P-201ENST00000458868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
RNU6-956P-201ENST00000458868 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
RNU6-956P-201ENST00000458868 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
RNU6-956P-201ENST00000458868 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
RNU6-956P-201ENST00000458868 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
RNU6-956P-201ENST00000458868 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
RNU6-956P-201ENST00000458868 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
RNU6-956P-201ENST00000458868 ZBTB22O15209 634 aa14.72□□□□□ -0.05
RNU6-956P-201ENST00000458868 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
RNU6-956P-201ENST00000458868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
RNU6-956P-201ENST00000458868 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
RNU6-956P-201ENST00000458868 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
RNU6-956P-201ENST00000458868 APLP2Q06481 763 aa14.59□□□□□ -0.07
RNU6-956P-201ENST00000458868 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
RNU6-956P-201ENST00000458868 CAPN15O75808 1086 aa14.52□□□□□ -0.09
RNU6-956P-201ENST00000458868 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
RNU6-956P-201ENST00000458868 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
RNU6-956P-201ENST00000458868 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
RNU6-956P-201ENST00000458868 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
RNU6-956P-201ENST00000458868 DSG3P32926 999 aa14.37□□□□□ -0.11
RNU6-956P-201ENST00000458868 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
RNU6-956P-201ENST00000458868 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
RNU6-956P-201ENST00000458868 ABCB7O75027 752 aa14.22□□□□□ -0.13
RNU6-956P-201ENST00000458868 POLA2Q14181 598 aa14.12□□□□□ -0.15
RNU6-956P-201ENST00000458868 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
RNU6-956P-201ENST00000458868 FBLN2P98095 1184 aa13.73□□□□□ -0.21
RNU6-956P-201ENST00000458868 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
RNU6-956P-201ENST00000458868 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
RNU6-956P-201ENST00000458868 POTEHQ6S545 545 aa13.67□□□□□ -0.22
RNU6-956P-201ENST00000458868 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
RNU6-956P-201ENST00000458868 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
RNU6-956P-201ENST00000458868 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
RNU6-956P-201ENST00000458868 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
RNU6-956P-201ENST00000458868 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
RNU6-956P-201ENST00000458868 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
RNU6-956P-201ENST00000458868 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
RNU6-956P-201ENST00000458868 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
RNU6-956P-201ENST00000458868 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
RNU6-956P-201ENST00000458868 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
RNU6-956P-201ENST00000458868 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
RNU6-956P-201ENST00000458868 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNU6-956P-201ENST00000458868 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
RNU6-956P-201ENST00000458868 PROM2Q8N271 834 aa13.07□□□□□ -0.32
RNU6-956P-201ENST00000458868 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
RNU6-956P-201ENST00000458868 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNU6-956P-201ENST00000458868 FKBP8Q14318 412 aa13.02□□□□□ -0.33
RNU6-956P-201ENST00000458868 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
RNU6-956P-201ENST00000458868 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
RNU6-956P-201ENST00000458868 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
RNU6-956P-201ENST00000458868 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
RNU6-956P-201ENST00000458868 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
RNU6-956P-201ENST00000458868 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
RNU6-956P-201ENST00000458868 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
RNU6-956P-201ENST00000458868 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
RNU6-956P-201ENST00000458868 HAX1O00165 279 aa12.61□□□□□ -0.39
RNU6-956P-201ENST00000458868 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
RNU6-956P-201ENST00000458868 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
RNU6-956P-201ENST00000458868 MIER1Q8N108 512 aa12.57□□□□□ -0.4
RNU6-956P-201ENST00000458868 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
RNU6-956P-201ENST00000458868 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
RNU6-956P-201ENST00000458868 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
RNU6-956P-201ENST00000458868 EVX2Q03828 476 aa12.51□□□□□ -0.41
RNU6-956P-201ENST00000458868 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
RNU6-956P-201ENST00000458868 CD44P16070 742 aaKnown RBP12.47□□□□□ -0.41
RNU6-956P-201ENST00000458868 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
RNU6-956P-201ENST00000458868 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
RNU6-956P-201ENST00000458868 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
RNU6-956P-201ENST00000458868 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
RNU6-956P-201ENST00000458868 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
RNU6-956P-201ENST00000458868 NUBP1P53384 320 aa12.32□□□□□ -0.44
RNU6-956P-201ENST00000458868 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
RNU6-956P-201ENST00000458868 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
RNU6-956P-201ENST00000458868 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
RNU6-956P-201ENST00000458868 CLCN6P51797 869 aa12.27□□□□□ -0.45
RNU6-956P-201ENST00000458868 GABBR2O75899 941 aa12.26□□□□□ -0.45
RNU6-956P-201ENST00000458868 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms