RNA–Protein interactions for RNA: ENST00000411236.1

RN7SKP142-201, Transcript of RNA, 7SK small nuclear pseudogene 142, humanhuman

BASIC

Gene RN7SKP142, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP142-201ENST00000411236 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
RN7SKP142-201ENST00000411236 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
RN7SKP142-201ENST00000411236 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
RN7SKP142-201ENST00000411236 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
RN7SKP142-201ENST00000411236 FOXD1Q16676 465 aa18.8■□□□□ 0.6
RN7SKP142-201ENST00000411236 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
RN7SKP142-201ENST00000411236 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
RN7SKP142-201ENST00000411236 ADRA2BP18089 450 aa17.85■□□□□ 0.45
RN7SKP142-201ENST00000411236 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
RN7SKP142-201ENST00000411236 MSH5O43196 834 aa17.49■□□□□ 0.39
RN7SKP142-201ENST00000411236 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
RN7SKP142-201ENST00000411236 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
RN7SKP142-201ENST00000411236 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
RN7SKP142-201ENST00000411236 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
RN7SKP142-201ENST00000411236 DMRT2Q9Y5R5 561 aa16.15■□□□□ 0.18
RN7SKP142-201ENST00000411236 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
RN7SKP142-201ENST00000411236 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
RN7SKP142-201ENST00000411236 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
RN7SKP142-201ENST00000411236 KCNA4P22459 653 aa15.73■□□□□ 0.11
RN7SKP142-201ENST00000411236 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
RN7SKP142-201ENST00000411236 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
RN7SKP142-201ENST00000411236 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
RN7SKP142-201ENST00000411236 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
RN7SKP142-201ENST00000411236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
RN7SKP142-201ENST00000411236 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
RN7SKP142-201ENST00000411236 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
RN7SKP142-201ENST00000411236 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
RN7SKP142-201ENST00000411236 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.05
RN7SKP142-201ENST00000411236 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
RN7SKP142-201ENST00000411236 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
RN7SKP142-201ENST00000411236 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
RN7SKP142-201ENST00000411236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
RN7SKP142-201ENST00000411236 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
RN7SKP142-201ENST00000411236 MYCNP04198 464 aaPredicted RBP14.52□□□□□ -0.09
RN7SKP142-201ENST00000411236 ZBTB22O15209 634 aa14.45□□□□□ -0.1
RN7SKP142-201ENST00000411236 APLP2Q06481 763 aa14.44□□□□□ -0.1
RN7SKP142-201ENST00000411236 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
RN7SKP142-201ENST00000411236 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP142-201ENST00000411236 CAPN15O75808 1086 aa14.3□□□□□ -0.12
RN7SKP142-201ENST00000411236 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
RN7SKP142-201ENST00000411236 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
RN7SKP142-201ENST00000411236 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
RN7SKP142-201ENST00000411236 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
RN7SKP142-201ENST00000411236 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
RN7SKP142-201ENST00000411236 DSG3P32926 999 aa14.12□□□□□ -0.15
RN7SKP142-201ENST00000411236 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
RN7SKP142-201ENST00000411236 ABCB7O75027 752 aa13.98□□□□□ -0.17
RN7SKP142-201ENST00000411236 POLA2Q14181 598 aa13.9□□□□□ -0.18
RN7SKP142-201ENST00000411236 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
RN7SKP142-201ENST00000411236 FBLN2P98095 1184 aa13.56□□□□□ -0.24
RN7SKP142-201ENST00000411236 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
RN7SKP142-201ENST00000411236 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP142-201ENST00000411236 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
RN7SKP142-201ENST00000411236 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
RN7SKP142-201ENST00000411236 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
RN7SKP142-201ENST00000411236 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
RN7SKP142-201ENST00000411236 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
RN7SKP142-201ENST00000411236 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP142-201ENST00000411236 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
RN7SKP142-201ENST00000411236 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
RN7SKP142-201ENST00000411236 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
RN7SKP142-201ENST00000411236 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
RN7SKP142-201ENST00000411236 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
RN7SKP142-201ENST00000411236 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
RN7SKP142-201ENST00000411236 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP142-201ENST00000411236 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
RN7SKP142-201ENST00000411236 FKBP8Q14318 412 aa12.87□□□□□ -0.35
RN7SKP142-201ENST00000411236 PROM2Q8N271 834 aa12.86□□□□□ -0.35
RN7SKP142-201ENST00000411236 POTEHQ6S545 545 aa12.83□□□□□ -0.36
RN7SKP142-201ENST00000411236 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
RN7SKP142-201ENST00000411236 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
RN7SKP142-201ENST00000411236 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
RN7SKP142-201ENST00000411236 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
RN7SKP142-201ENST00000411236 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
RN7SKP142-201ENST00000411236 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
RN7SKP142-201ENST00000411236 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
RN7SKP142-201ENST00000411236 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
RN7SKP142-201ENST00000411236 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
RN7SKP142-201ENST00000411236 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
RN7SKP142-201ENST00000411236 HAX1O00165 279 aa12.41□□□□□ -0.42
RN7SKP142-201ENST00000411236 MIER1Q8N108 512 aa12.41□□□□□ -0.42
RN7SKP142-201ENST00000411236 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
RN7SKP142-201ENST00000411236 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
RN7SKP142-201ENST00000411236 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
RN7SKP142-201ENST00000411236 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
RN7SKP142-201ENST00000411236 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
RN7SKP142-201ENST00000411236 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP142-201ENST00000411236 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
RN7SKP142-201ENST00000411236 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP142-201ENST00000411236 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP142-201ENST00000411236 EVX2Q03828 476 aa12.23□□□□□ -0.45
RN7SKP142-201ENST00000411236 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
RN7SKP142-201ENST00000411236 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
RN7SKP142-201ENST00000411236 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
RN7SKP142-201ENST00000411236 CLCN6P51797 869 aa12.12□□□□□ -0.47
RN7SKP142-201ENST00000411236 NUBP1P53384 320 aa12.12□□□□□ -0.47
RN7SKP142-201ENST00000411236 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
RN7SKP142-201ENST00000411236 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
RN7SKP142-201ENST00000411236 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
RN7SKP142-201ENST00000411236 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms