Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR4512-201ENST00000583257 77 ntBASIC2.83□□□□□ -1.96
UBA52P62987 AL354976.1-201ENST00000613843 387 ntBASIC2.83□□□□□ -1.96
UBA52P62987 U4.6-201ENST00000621618 127 ntBASIC2.83□□□□□ -1.96
UBA52P62987 PLCE1P1-201ENST00000622094 305 ntBASIC2.83□□□□□ -1.96
UBA52P62987 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
UBA52P62987 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
UBA52P62987 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UBA52P62987 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
UBA52P62987 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.83□□□□□ -1.96
UBA52P62987 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBA52P62987 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
UBA52P62987 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.83□□□□□ -1.96
UBA52P62987 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UBA52P62987 AC138393.1-206ENST00000540997 1886 ntBASIC2.82□□□□□ -1.96
UBA52P62987 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBA52P62987 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
UBA52P62987 MIR124-3-201ENST00000384866 87 ntBASIC2.82□□□□□ -1.96
UBA52P62987 MIR591-201ENST00000385290 95 ntBASIC2.82□□□□□ -1.96
UBA52P62987 TAF9BP1-201ENST00000396646 746 ntBASIC2.82□□□□□ -1.96
UBA52P62987 AC245054.2-201ENST00000415639 319 ntBASIC2.82□□□□□ -1.96
UBA52P62987 BOLA3P4-201ENST00000418151 400 ntBASIC2.82□□□□□ -1.96
UBA52P62987 AC022022.1-201ENST00000430304 178 ntBASIC2.82□□□□□ -1.96
UBA52P62987 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.82□□□□□ -1.96
UBA52P62987 RPL21P110-201ENST00000433345 446 ntBASIC2.82□□□□□ -1.96
UBA52P62987 SNORD108-201ENST00000459332 71 ntBASIC2.82□□□□□ -1.96
UBA52P62987 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.82□□□□□ -1.96
UBA52P62987 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.82□□□□□ -1.96
UBA52P62987 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.82□□□□□ -1.96
UBA52P62987 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBA52P62987 AC006116.7-201ENST00000590141 756 ntBASIC2.82□□□□□ -1.96
UBA52P62987 MIR7112-201ENST00000616126 65 ntBASIC2.82□□□□□ -1.96
UBA52P62987 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
UBA52P62987 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.82□□□□□ -1.96
UBA52P62987 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.82□□□□□ -1.96
UBA52P62987 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
UBA52P62987 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
UBA52P62987 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
UBA52P62987 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
UBA52P62987 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UBA52P62987 SNORA48.5-201ENST00000391143 135 ntBASIC2.81□□□□□ -1.96
UBA52P62987 RPL7P44-201ENST00000424827 742 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AL353705.1-201ENST00000433468 480 ntBASIC2.81□□□□□ -1.96
UBA52P62987 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC006994.1-201ENST00000438212 839 ntBASIC2.81□□□□□ -1.96
UBA52P62987 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 AC097262.1-201ENST00000452559 548 ntBASIC2.81□□□□□ -1.96
UBA52P62987 U3.44-201ENST00000458938 192 ntBASIC2.81□□□□□ -1.96
UBA52P62987 ST13P14-201ENST00000474095 734 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 RPL7P23-201ENST00000493874 747 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 RN7SKP5-201ENST00000517045 272 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC007536.1-201ENST00000533382 349 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.81□□□□□ -1.96
UBA52P62987 AL161713.1-201ENST00000555538 145 ntBASIC2.81□□□□□ -1.96
UBA52P62987 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.81□□□□□ -1.96
UBA52P62987 MIR4298-201ENST00000584380 73 ntBASIC2.81□□□□□ -1.96
UBA52P62987 AC010680.4-201ENST00000605334 543 ntBASIC2.81□□□□□ -1.96
UBA52P62987 CR392039.4-201ENST00000624968 501 ntBASIC2.81□□□□□ -1.96
UBA52P62987 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UBA52P62987 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
UBA52P62987 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
UBA52P62987 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
UBA52P62987 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.8□□□□□ -1.96
UBA52P62987 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
UBA52P62987 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UBA52P62987 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
UBA52P62987 MIR887-201ENST00000401258 79 ntBASIC2.8□□□□□ -1.96
UBA52P62987 HSPE1P26-201ENST00000405341 275 ntBASIC2.8□□□□□ -1.96
UBA52P62987 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.8□□□□□ -1.96
UBA52P62987 AL024507.1-201ENST00000412741 274 ntBASIC2.8□□□□□ -1.96
UBA52P62987 BX323014.1-201ENST00000412876 237 ntBASIC2.8□□□□□ -1.96
UBA52P62987 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.8□□□□□ -1.96
UBA52P62987 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.8□□□□□ -1.96
UBA52P62987 YWHAZP7-201ENST00000436906 631 ntBASIC2.8□□□□□ -1.96
UBA52P62987 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.8□□□□□ -1.96
UBA52P62987 RPS27P5-201ENST00000444247 244 ntBASIC2.8□□□□□ -1.96
UBA52P62987 Z99127.3-201ENST00000448158 395 ntBASIC2.8□□□□□ -1.96
UBA52P62987 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.8□□□□□ -1.96
UBA52P62987 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.8□□□□□ -1.96
UBA52P62987 AL049873.1-201ENST00000480540 376 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AC011037.1-201ENST00000483964 558 ntBASIC2.8□□□□□ -1.96
UBA52P62987 ATG10-AS1-201ENST00000504846 648 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AC010285.3-201ENST00000511668 676 ntBASIC2.8□□□□□ -1.96
UBA52P62987 RNU2-58P-201ENST00000516403 183 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AP001207.2-201ENST00000519490 539 ntBASIC2.8□□□□□ -1.96
UBA52P62987 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.8□□□□□ -1.96
UBA52P62987 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.8□□□□□ -1.96
UBA52P62987 AC010198.2-201ENST00000550612 259 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.8□□□□□ -1.96
UBA52P62987 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.8□□□□□ -1.96
UBA52P62987 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms