RNA–Protein interactions for RNA: ENST00000444263.5

LINC00278-202, long intergenic non-protein coding RNA 278, humanhuman

TSL 3 BASIC

Gene LINC00278, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-202ENST00000444263 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
LINC00278-202ENST00000444263 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
LINC00278-202ENST00000444263 SENP3Q9H4L4 574 aaPredicted RBP21.8■■□□□ 1.08
LINC00278-202ENST00000444263 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
LINC00278-202ENST00000444263 FOXD1Q16676 465 aa20.23■□□□□ 0.83
LINC00278-202ENST00000444263 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
LINC00278-202ENST00000444263 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
LINC00278-202ENST00000444263 MSH5O43196 834 aa18.99■□□□□ 0.63
LINC00278-202ENST00000444263 ADRA2BP18089 450 aa18.95■□□□□ 0.62
LINC00278-202ENST00000444263 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
LINC00278-202ENST00000444263 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
LINC00278-202ENST00000444263 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
LINC00278-202ENST00000444263 MAPK8IP2Q13387 824 aaPredicted RBP17.34■□□□□ 0.37
LINC00278-202ENST00000444263 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
LINC00278-202ENST00000444263 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
LINC00278-202ENST00000444263 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
LINC00278-202ENST00000444263 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
LINC00278-202ENST00000444263 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
LINC00278-202ENST00000444263 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
LINC00278-202ENST00000444263 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
LINC00278-202ENST00000444263 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
LINC00278-202ENST00000444263 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
LINC00278-202ENST00000444263 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
LINC00278-202ENST00000444263 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
LINC00278-202ENST00000444263 KCNA4P22459 653 aa15.99■□□□□ 0.15
LINC00278-202ENST00000444263 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
LINC00278-202ENST00000444263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
LINC00278-202ENST00000444263 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
LINC00278-202ENST00000444263 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
LINC00278-202ENST00000444263 CAPN15O75808 1086 aa15.36■□□□□ 0.05
LINC00278-202ENST00000444263 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
LINC00278-202ENST00000444263 APLP2Q06481 763 aa15.28■□□□□ 0.04
LINC00278-202ENST00000444263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
LINC00278-202ENST00000444263 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
LINC00278-202ENST00000444263 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
LINC00278-202ENST00000444263 DSG3P32926 999 aa15.15■□□□□ 0.02
LINC00278-202ENST00000444263 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
LINC00278-202ENST00000444263 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
LINC00278-202ENST00000444263 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
LINC00278-202ENST00000444263 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
LINC00278-202ENST00000444263 ABCB7O75027 752 aa14.98□□□□□ -0.01
LINC00278-202ENST00000444263 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
LINC00278-202ENST00000444263 POLA2Q14181 598 aa14.69□□□□□ -0.06
LINC00278-202ENST00000444263 ZBTB22O15209 634 aa14.65□□□□□ -0.06
LINC00278-202ENST00000444263 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
LINC00278-202ENST00000444263 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
LINC00278-202ENST00000444263 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
LINC00278-202ENST00000444263 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
LINC00278-202ENST00000444263 POTEHQ6S545 545 aa14.39□□□□□ -0.11
LINC00278-202ENST00000444263 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
LINC00278-202ENST00000444263 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
LINC00278-202ENST00000444263 FBLN2P98095 1184 aa14.19□□□□□ -0.14
LINC00278-202ENST00000444263 CHRDL2Q6WN34 429 aa14.14□□□□□ -0.15
LINC00278-202ENST00000444263 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
LINC00278-202ENST00000444263 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
LINC00278-202ENST00000444263 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
LINC00278-202ENST00000444263 SPDYE2BA6NHP3 402 aa14□□□□□ -0.17
LINC00278-202ENST00000444263 SPDYE6P0CI01 402 aa14□□□□□ -0.17
LINC00278-202ENST00000444263 SPDYE2Q495Y8 402 aa14□□□□□ -0.17
LINC00278-202ENST00000444263 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
LINC00278-202ENST00000444263 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
LINC00278-202ENST00000444263 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
LINC00278-202ENST00000444263 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
LINC00278-202ENST00000444263 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
LINC00278-202ENST00000444263 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
LINC00278-202ENST00000444263 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
LINC00278-202ENST00000444263 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC00278-202ENST00000444263 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00278-202ENST00000444263 HAX1O00165 279 aa13.58□□□□□ -0.24
LINC00278-202ENST00000444263 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
LINC00278-202ENST00000444263 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
LINC00278-202ENST00000444263 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
LINC00278-202ENST00000444263 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
LINC00278-202ENST00000444263 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
LINC00278-202ENST00000444263 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
LINC00278-202ENST00000444263 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
LINC00278-202ENST00000444263 EVX2Q03828 476 aa13.28□□□□□ -0.28
LINC00278-202ENST00000444263 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
LINC00278-202ENST00000444263 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
LINC00278-202ENST00000444263 CREBZFQ9NS37 354 aa13.13□□□□□ -0.31
LINC00278-202ENST00000444263 GABBR2O75899 941 aa13.07□□□□□ -0.32
LINC00278-202ENST00000444263 PROM2Q8N271 834 aa13.02□□□□□ -0.33
LINC00278-202ENST00000444263 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00278-202ENST00000444263 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
LINC00278-202ENST00000444263 ZRANB1Q9UGI0 708 aa12.98□□□□□ -0.33
LINC00278-202ENST00000444263 CLCN6P51797 869 aa12.96□□□□□ -0.33
LINC00278-202ENST00000444263 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
LINC00278-202ENST00000444263 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
LINC00278-202ENST00000444263 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
LINC00278-202ENST00000444263 FKBP8Q14318 412 aa12.86□□□□□ -0.35
LINC00278-202ENST00000444263 MIER1Q8N108 512 aa12.83□□□□□ -0.36
LINC00278-202ENST00000444263 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
LINC00278-202ENST00000444263 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
LINC00278-202ENST00000444263 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
LINC00278-202ENST00000444263 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
LINC00278-202ENST00000444263 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
LINC00278-202ENST00000444263 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
LINC00278-202ENST00000444263 LHX8Q68G74 356 aa12.7□□□□□ -0.38
LINC00278-202ENST00000444263 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
LINC00278-202ENST00000444263 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 2320.5 ms