RNA–Protein interactions for RNA: ENST00000500704.6

USP45-208, Transcript of ubiquitin specific peptidase 45, human

APPRIS P1 TSL 5 BASIC

Gene USP45, Length 5,826 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP45-208	ENST00000500704	AEBP2	Q6ZN18	517 aa	Predicted RBP	6.08	□□□□□ -1.44
USP45-208	ENST00000500704	CHIC1	Q5VXU3	224 aa		6.03	□□□□□ -1.44
USP45-208	ENST00000500704	PHF23	Q9BUL5	403 aa	Predicted RBP	5.57	□□□□□ -1.52
USP45-208	ENST00000500704	EHMT2	Q96KQ7	1210 aa		5.44	□□□□□ -1.54
USP45-208	ENST00000500704	MYT1	Q01538	1121 aa		5.33	□□□□□ -1.56
USP45-208	ENST00000500704	PELP1	Q8IZL8	1130 aa	Known RBP	5.29	□□□□□ -1.56
USP45-208	ENST00000500704	PLPPR3	Q6T4P5	718 aa		5.14	□□□□□ -1.59
USP45-208	ENST00000500704	KCNA4	P22459	653 aa		5.13	□□□□□ -1.59
USP45-208	ENST00000500704	ADRA2B	P18089	450 aa		5.1	□□□□□ -1.59
USP45-208	ENST00000500704	TTBK1	Q5TCY1	1321 aa	Predicted RBP	5.01	□□□□□ -1.61
USP45-208	ENST00000500704	CSRNP3	Q8WYN3	585 aa		4.99	□□□□□ -1.61
USP45-208	ENST00000500704	SLC24A1	O60721	1099 aa		4.96	□□□□□ -1.62
USP45-208	ENST00000500704	ERICH6	Q7L0X2	663 aa		4.95	□□□□□ -1.62
USP45-208	ENST00000500704	RTN4	Q9NQC3	1192 aa	Known RBP	4.94	□□□□□ -1.62
USP45-208	ENST00000500704	PPP6R1	Q9UPN7	881 aa		4.94	□□□□□ -1.62
USP45-208	ENST00000500704	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.79	□□□□□ -1.64
USP45-208	ENST00000500704	ZBTB22	O15209	634 aa		4.79	□□□□□ -1.64
USP45-208	ENST00000500704	SENP3	Q9H4L4	574 aa	Predicted RBP	4.76	□□□□□ -1.65
USP45-208	ENST00000500704	CENPB	P07199	599 aa	Predicted RBP	4.68	□□□□□ -1.66
USP45-208	ENST00000500704	PRKCSH	P14314	528 aa	Predicted RBP	4.65	□□□□□ -1.66
USP45-208	ENST00000500704	NPM3	O75607	178 aa	Known RBP	4.64	□□□□□ -1.67
USP45-208	ENST00000500704	FOXD1	Q16676	465 aa		4.62	□□□□□ -1.67
USP45-208	ENST00000500704	RANGAP1	P46060	587 aa	Predicted RBP	4.6	□□□□□ -1.67
USP45-208	ENST00000500704	PPP4R3CP	Q6ZMV5	832 aa		4.58	□□□□□ -1.68
USP45-208	ENST00000500704	EIF5B	O60841	1220 aa	Known RBP	4.55	□□□□□ -1.68
USP45-208	ENST00000500704	BCL11A	Q9H165	835 aa		4.54	□□□□□ -1.68
USP45-208	ENST00000500704	CCER1	Q8TC90	406 aa	Predicted RBP	4.52	□□□□□ -1.69
USP45-208	ENST00000500704	AMER1	Q5JTC6	1135 aa	Predicted RBP	4.51	□□□□□ -1.69
USP45-208	ENST00000500704	DAXX	Q9UER7	740 aa	Predicted RBP	4.5	□□□□□ -1.69
USP45-208	ENST00000500704	FKBP8	Q14318	412 aa		4.5	□□□□□ -1.69
USP45-208	ENST00000500704	HRC	P23327	699 aa		4.49	□□□□□ -1.69
USP45-208	ENST00000500704	YTHDC1	Q96MU7	727 aa	Known RBP	4.47	□□□□□ -1.69
USP45-208	ENST00000500704	GLIPR1L2	Q4G1C9	344 aa		4.46	□□□□□ -1.7
USP45-208	ENST00000500704	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.45	□□□□□ -1.7
USP45-208	ENST00000500704	ZEB1	P37275	1124 aa	Predicted RBP	4.43	□□□□□ -1.7
USP45-208	ENST00000500704	APLP2	Q06481	763 aa		4.42	□□□□□ -1.7
USP45-208	ENST00000500704	PCGF6	Q9BYE7	350 aa		4.4	□□□□□ -1.7
USP45-208	ENST00000500704	MAPK8IP2	Q13387	824 aa	Predicted RBP	4.4	□□□□□ -1.71
USP45-208	ENST00000500704	NEFL	P07196	543 aa		4.37	□□□□□ -1.71
USP45-208	ENST00000500704	GTF3C3	Q9Y5Q9	886 aa		4.37	□□□□□ -1.71
USP45-208	ENST00000500704	MYT1L	Q9UL68	1186 aa		4.36	□□□□□ -1.71
USP45-208	ENST00000500704	FOXD4L1	Q9NU39	408 aa		4.35	□□□□□ -1.71
USP45-208	ENST00000500704	PODXL2	Q9NZ53	605 aa		4.35	□□□□□ -1.71
USP45-208	ENST00000500704	ANP32E	Q9BTT0	268 aa		4.34	□□□□□ -1.71
USP45-208	ENST00000500704	SCAF1	Q9H7N4	1312 aa	Known RBP	4.34	□□□□□ -1.71
USP45-208	ENST00000500704	DCAF8L2	P0C7V8	631 aa		4.34	□□□□□ -1.72
USP45-208	ENST00000500704	RTL5	Q5HYW3	569 aa	Predicted RBP	4.34	□□□□□ -1.72
USP45-208	ENST00000500704	TPRN	Q4KMQ1	711 aa		4.33	□□□□□ -1.72
USP45-208	ENST00000500704	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.33	□□□□□ -1.72
USP45-208	ENST00000500704	TIMELESS	Q9UNS1	1208 aa		4.33	□□□□□ -1.72
USP45-208	ENST00000500704	ACIN1	Q9UKV3	1341 aa	Known RBP	4.32	□□□□□ -1.72
USP45-208	ENST00000500704	NCBP3	Q53F19	620 aa	Known RBP	4.32	□□□□□ -1.72
USP45-208	ENST00000500704	FBLN2	P98095	1184 aa		4.31	□□□□□ -1.72
USP45-208	ENST00000500704	TAOK2	Q9UL54	1235 aa		4.31	□□□□□ -1.72
USP45-208	ENST00000500704	PPARGC1B	Q86YN6	1023 aa	Known RBP	4.31	□□□□□ -1.72
USP45-208	ENST00000500704	CLSPN	Q9HAW4	1339 aa		4.31	□□□□□ -1.72
USP45-208	ENST00000500704	HAP1	P54257	671 aa	Predicted RBP	4.3	□□□□□ -1.72
USP45-208	ENST00000500704	PLCB2	Q00722	1185 aa		4.3	□□□□□ -1.72
USP45-208	ENST00000500704	TULP1	O00294	542 aa	Predicted RBP	4.29	□□□□□ -1.72
USP45-208	ENST00000500704	SLC4A2	P04920	1241 aa		4.28	□□□□□ -1.72
USP45-208	ENST00000500704	KDM2A	Q9Y2K7	1162 aa		4.27	□□□□□ -1.73
USP45-208	ENST00000500704	PKNOX2	Q96KN3	472 aa		4.26	□□□□□ -1.73
USP45-208	ENST00000500704	POLR3GL	Q9BT43	218 aa		4.24	□□□□□ -1.73
USP45-208	ENST00000500704	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.24	□□□□□ -1.73
USP45-208	ENST00000500704	CNKSR2	Q8WXI2	1034 aa		4.21	□□□□□ -1.73
USP45-208	ENST00000500704	ZNF326	Q5BKZ1	582 aa	Known RBP	4.21	□□□□□ -1.74
USP45-208	ENST00000500704	ERICH6B	Q5W0A0	696 aa		4.2	□□□□□ -1.74
USP45-208	ENST00000500704	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.19	□□□□□ -1.74
USP45-208	ENST00000500704	PDE4C	Q08493	712 aa		4.19	□□□□□ -1.74
USP45-208	ENST00000500704	NEUROD1	Q13562	356 aa		4.19	□□□□□ -1.74
USP45-208	ENST00000500704		A0A0U1RQG5	324 aa	Predicted RBP	4.18	□□□□□ -1.74
USP45-208	ENST00000500704	UBE2Q2	Q8WVN8	375 aa		4.18	□□□□□ -1.74
USP45-208	ENST00000500704	BCAN	Q96GW7	911 aa		4.18	□□□□□ -1.74
USP45-208	ENST00000500704	PLEKHG5	O94827	1062 aa		4.17	□□□□□ -1.74
USP45-208	ENST00000500704	HOMEZ	Q8IX15	550 aa		4.16	□□□□□ -1.74
USP45-208	ENST00000500704	DIEXF	Q68CQ4	756 aa	Known RBP	4.16	□□□□□ -1.74
USP45-208	ENST00000500704	CCDC136	Q96JN2	1154 aa		4.16	□□□□□ -1.74
USP45-208	ENST00000500704	ARX	Q96QS3	562 aa		4.16	□□□□□ -1.74
USP45-208	ENST00000500704	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.16	□□□□□ -1.74
USP45-208	ENST00000500704	NCL	P19338	710 aa	Known RBP	4.15	□□□□□ -1.74
USP45-208	ENST00000500704	PDIA4	P13667	645 aa	Known RBP	4.15	□□□□□ -1.75
USP45-208	ENST00000500704	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	4.15	□□□□□ -1.75
USP45-208	ENST00000500704	CFAP44	Q96MT7	982 aa		4.14	□□□□□ -1.75
USP45-208	ENST00000500704	VSIG10	Q8N0Z9	540 aa		4.14	□□□□□ -1.75
USP45-208	ENST00000500704	PKD2	Q13563	968 aa		4.13	□□□□□ -1.75
USP45-208	ENST00000500704	TSHZ2	Q9NRE2	1034 aa		4.13	□□□□□ -1.75
USP45-208	ENST00000500704	TRIM26	Q12899	539 aa	Predicted RBP	4.13	□□□□□ -1.75
USP45-208	ENST00000500704	C14orf37	Q86TY3	774 aa		4.13	□□□□□ -1.75
USP45-208	ENST00000500704	NPM1	P06748	294 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
USP45-208	ENST00000500704	CDK11B	P21127	795 aa	Known RBP	4.13	□□□□□ -1.75
USP45-208	ENST00000500704	TNNT2	P45379	298 aa	Predicted RBP	4.13	□□□□□ -1.75
USP45-208	ENST00000500704	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.12	□□□□□ -1.75
USP45-208	ENST00000500704	DEK	P35659	375 aa	Known RBP	4.12	□□□□□ -1.75
USP45-208	ENST00000500704	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.12	□□□□□ -1.75
USP45-208	ENST00000500704	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.11	□□□□□ -1.75
USP45-208	ENST00000500704	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.11	□□□□□ -1.75
USP45-208	ENST00000500704	SUPT5H	O00267	1087 aa	Known RBP	4.11	□□□□□ -1.75
USP45-208	ENST00000500704	NBR1	Q14596	966 aa		4.09	□□□□□ -1.75
USP45-208	ENST00000500704	NPM2	Q86SE8	214 aa	Known RBP	4.08	□□□□□ -1.76
USP45-208	ENST00000500704	CNGB1	Q14028	1251 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms