Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
CLCA3PQ9Y6N3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 AL353708.3-201ENST00000610272 989 ntBASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCA3PQ9Y6N3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 AC073195.1-201ENST00000607241 877 ntBASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 AL049637.2-201ENST00000641778 930 ntBASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCA3PQ9Y6N3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 NIFKP9-201ENST00000419265 221 ntBASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 KSR1P1-201ENST00000446298 240 ntBASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
CLCA3PQ9Y6N3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCA3PQ9Y6N3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms