Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC3AQ9Y2H6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.68■□□□□ 0.74
FNDC3AQ9Y2H6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC3AQ9Y2H6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
FNDC3AQ9Y2H6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 TFP1-202ENST00000475455 1573 ntBASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 AP002982.1-201ENST00000492365 877 ntBASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 AC009237.14-201ENST00000609975 1594 ntBASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FNDC3AQ9Y2H6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 UNC93B2-201ENST00000285383 730 ntBASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 AC005521.1-201ENST00000393351 872 ntBASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 MIR1238-201ENST00000408483 83 ntBASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 AC004264.1-201ENST00000608354 794 ntBASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 AP006587.1-201ENST00000534129 1502 ntBASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC3AQ9Y2H6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC3AQ9Y2H6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 AL590326.2-201ENST00000625139 305 ntBASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC3AQ9Y2H6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms