Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 AC092667.1-201ENST00000434301 2586 ntBASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKAP1Q9Y2A7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 PRSS44-201ENST00000515154 1146 ntBASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 WWOX-216ENST00000569818 525 ntBASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 AL138966.2-201ENST00000621997 464 ntBASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NCKAP1Q9Y2A7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 RNF152P1-201ENST00000397754 604 ntBASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 COX11P1-201ENST00000489116 835 ntBASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCKAP1Q9Y2A7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCKAP1Q9Y2A7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC117947.1-201ENST00000427448 529 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC022616.7-201ENST00000525383 220 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC139887.4-201ENST00000607877 719 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC141257.4-201ENST00000634557 245 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AC136944.6-201ENST00000634818 245 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 AL031432.5-201ENST00000641059 760 ntBASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCKAP1Q9Y2A7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms