Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 SPDYE15P-201ENST00000424157 909 ntBASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 FGF14-AS2-201ENST00000606448 1074 ntBASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDK11AQ9UQ88 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 TBC1D3P2-202ENST00000577902 1649 ntBASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 AL162377.1-201ENST00000618844 1793 ntBASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 ILF2-202ENST00000368681 726 ntTSL 2 BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 GAD2-202ENST00000376248 680 ntTSL 5 BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.78■■■□□ 2.36
CDK11AQ9UQ88 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 ATP5G2P1-201ENST00000433580 426 ntBASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 TPM4P1-201ENST00000436100 807 ntBASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 CR769767.2-201ENST00000622735 460 ntBASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 AP005212.1-201ENST00000581547 1997 ntBASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDK11AQ9UQ88 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CDK11AQ9UQ88 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.76■■■□□ 2.36
CDK11AQ9UQ88 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDK11AQ9UQ88 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 CLN6-214ENST00000636314 442 ntTSL 3 BASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 AC104417.2-201ENST00000562989 1793 ntBASIC29.75■■■□□ 2.35
CDK11AQ9UQ88 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 PP7080-204ENST00000510714 601 ntTSL 3 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDK11AQ9UQ88 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 SPDYE13P-201ENST00000445314 798 ntBASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.73■■■□□ 2.35
CDK11AQ9UQ88 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC29.72■■■□□ 2.35
CDK11AQ9UQ88 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms