Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
RABGEF1Q9UJ41 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 AC018553.1-201ENST00000616682 1458 ntBASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RABGEF1Q9UJ41 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 AC006557.6-201ENST00000623071 864 ntBASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 AL049812.1-201ENST00000432563 2267 ntBASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RABGEF1Q9UJ41 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RABGEF1Q9UJ41 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RABGEF1Q9UJ41 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms