Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 AC139887.4-201ENST00000607877 719 ntBASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRIT1Q9P2V4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 LINC01238-205ENST00000567549 1107 ntBASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.63■□□□□ 0.57
LRIT1Q9P2V4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 AL512604.3-201ENST00000569583 964 ntBASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRIT1Q9P2V4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 COX11P1-201ENST00000489116 835 ntBASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 AC063952.2-201ENST00000498792 1227 ntBASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 AC022616.7-201ENST00000525383 220 ntBASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 AC141257.4-201ENST00000634557 245 ntBASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 AC136944.6-201ENST00000634818 245 ntBASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRIT1Q9P2V4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT1Q9P2V4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRIT1Q9P2V4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRIT1Q9P2V4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms