Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TREM2Q9NZC2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.62■□□□□ 0.25
TREM2Q9NZC2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 HTR7P1-201ENST00000538670 1336 ntBASIC16.62■□□□□ 0.25
TREM2Q9NZC2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
TREM2Q9NZC2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 RARRES2P10-201ENST00000564312 460 ntBASIC16.61■□□□□ 0.25
TREM2Q9NZC2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 KRT17P2-201ENST00000300992 1314 ntBASIC16.61■□□□□ 0.25
TREM2Q9NZC2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TREM2Q9NZC2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 KRT16P5-201ENST00000455284 522 ntBASIC16.6■□□□□ 0.25
TREM2Q9NZC2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms