Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 RAP2CP1-201ENST00000605103 478 ntBASIC19.03■□□□□ 0.64
MKS1Q9NXB0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 AP006587.1-201ENST00000534129 1502 ntBASIC19.03■□□□□ 0.64
MKS1Q9NXB0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MKS1Q9NXB0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 KRT18P16-201ENST00000510337 1294 ntBASIC19.02■□□□□ 0.64
MKS1Q9NXB0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 AL121906.2-201ENST00000621597 723 ntBASIC19.02■□□□□ 0.64
MKS1Q9NXB0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MKS1Q9NXB0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MKS1Q9NXB0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MKS1Q9NXB0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
MKS1Q9NXB0 AC124283.5-201ENST00000624661 1809 ntBASIC19.02■□□□□ 0.63
MKS1Q9NXB0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MKS1Q9NXB0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 RPS2P52-201ENST00000469610 820 ntBASIC19.01■□□□□ 0.63
MKS1Q9NXB0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
MKS1Q9NXB0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MKS1Q9NXB0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19■□□□□ 0.63
MKS1Q9NXB0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19■□□□□ 0.63
MKS1Q9NXB0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19■□□□□ 0.63
MKS1Q9NXB0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19■□□□□ 0.63
MKS1Q9NXB0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19■□□□□ 0.63
MKS1Q9NXB0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 MKRN4P-201ENST00000444706 1521 ntBASIC19■□□□□ 0.63
MKS1Q9NXB0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
MKS1Q9NXB0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
MKS1Q9NXB0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms