Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA4BQ9NPR2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 KRT18P6-201ENST00000555540 1265 ntBASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA4BQ9NPR2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 CD99P1-205ENST00000527459 561 ntBASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 AC008687.6-201ENST00000596318 630 ntBASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA4BQ9NPR2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 AL121829.2-201ENST00000620908 328 ntBASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA4BQ9NPR2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms