Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CBX8Q9HC52 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.52■■□□□ 1.03
CBX8Q9HC52 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CBX8Q9HC52 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CBX8Q9HC52 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.52■■□□□ 1.03
CBX8Q9HC52 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CBX8Q9HC52 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.51■■□□□ 1.03
CBX8Q9HC52 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBX8Q9HC52 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.5■■□□□ 1.03
CBX8Q9HC52 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBX8Q9HC52 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.49■■□□□ 1.03
CBX8Q9HC52 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 LTB4R2-202ENST00000528054 3092 ntBASIC21.49■■□□□ 1.03
CBX8Q9HC52 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 GPX1P1-201ENST00000388829 606 ntBASIC21.49■■□□□ 1.03
CBX8Q9HC52 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 AC008694.1-202ENST00000636953 945 ntBASIC21.49■■□□□ 1.03
CBX8Q9HC52 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.49■■□□□ 1.03
CBX8Q9HC52 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBX8Q9HC52 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.48■■□□□ 1.03
CBX8Q9HC52 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms