Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRM3Q9HC36 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 FEM1AP3-201ENST00000403722 1741 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 AC239809.2-201ENST00000415381 517 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 TSPY21P-201ENST00000433481 731 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 AC133681.1-201ENST00000465482 601 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 ITM2C-210ENST00000620962 501 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 AL023875.1-201ENST00000640777 796 ntBASIC19.28■□□□□ 0.68
MRM3Q9HC36 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRM3Q9HC36 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.28■□□□□ 0.68
MRM3Q9HC36 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 AC093503.3-201ENST00000624917 2352 ntBASIC19.27■□□□□ 0.68
MRM3Q9HC36 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 KRASP1-201ENST00000407852 552 ntBASIC19.27■□□□□ 0.68
MRM3Q9HC36 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
MRM3Q9HC36 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRM3Q9HC36 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MRM3Q9HC36 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MRM3Q9HC36 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AC006333.2-201ENST00000607957 2099 ntBASIC19.26■□□□□ 0.67
MRM3Q9HC36 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 RNF165-205ENST00000588679 2904 ntBASIC19.26■□□□□ 0.67
MRM3Q9HC36 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 CROCCP3-202ENST00000420820 1947 ntBASIC19.26■□□□□ 0.67
MRM3Q9HC36 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AC124016.1-201ENST00000609552 612 ntBASIC19.26■□□□□ 0.67
MRM3Q9HC36 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
MRM3Q9HC36 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRM3Q9HC36 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.25■□□□□ 0.67
MRM3Q9HC36 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MRM3Q9HC36 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
MRM3Q9HC36 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 KRT18P29-201ENST00000397031 1267 ntBASIC19.25■□□□□ 0.67
MRM3Q9HC36 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRM3Q9HC36 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms