Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 ATP5G2P1-201ENST00000433580 426 ntBASIC22.42■■□□□ 1.18
EFCC1Q9HA90 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 FDX1P1-201ENST00000449115 551 ntBASIC22.42■■□□□ 1.18
EFCC1Q9HA90 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
EFCC1Q9HA90 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 SMG8-203ENST00000578922 2178 ntBASIC22.41■■□□□ 1.18
EFCC1Q9HA90 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.41■■□□□ 1.18
EFCC1Q9HA90 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 TSPY21P-201ENST00000433481 731 ntBASIC22.4■■□□□ 1.18
EFCC1Q9HA90 PVRIG2P-201ENST00000435460 978 ntBASIC22.4■■□□□ 1.18
EFCC1Q9HA90 AP000347.1-202ENST00000435868 847 ntBASIC22.4■■□□□ 1.18
EFCC1Q9HA90 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 TSPY23P-201ENST00000440136 739 ntBASIC22.4■■□□□ 1.18
EFCC1Q9HA90 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
EFCC1Q9HA90 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
EFCC1Q9HA90 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
EFCC1Q9HA90 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.39■■□□□ 1.18
EFCC1Q9HA90 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
EFCC1Q9HA90 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 RN7SL510P-201ENST00000581311 263 ntBASIC22.39■■□□□ 1.17
EFCC1Q9HA90 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
EFCC1Q9HA90 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 ZNF444P1-201ENST00000559497 298 ntBASIC22.38■■□□□ 1.17
EFCC1Q9HA90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
EFCC1Q9HA90 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms