Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRC40Q9H9A6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 C1QL1P1-201ENST00000568105 661 ntBASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRC40Q9H9A6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 AC239809.2-201ENST00000415381 517 ntBASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 AL161938.1-201ENST00000569833 2180 ntBASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC40Q9H9A6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 AL023875.1-201ENST00000640777 796 ntBASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC40Q9H9A6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms