Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC097658.1-201ENST00000475555 843 ntBASIC21.16■□□□□ 0.98
VPS16Q9H269 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS16Q9H269 AC104581.1-202ENST00000635932 2618 ntBASIC21.16■□□□□ 0.98
VPS16Q9H269 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS16Q9H269 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS16Q9H269 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 KRT8P8-201ENST00000434750 1448 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 MIR4758-201ENST00000577688 71 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 AL121906.2-201ENST00000621597 723 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 MYC-209ENST00000641252 345 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS16Q9H269 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 FP475955.4-201ENST00000623131 1990 ntBASIC21.15■□□□□ 0.98
VPS16Q9H269 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
VPS16Q9H269 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS16Q9H269 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VPS16Q9H269 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS16Q9H269 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
VPS16Q9H269 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.14■□□□□ 0.98
VPS16Q9H269 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS16Q9H269 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.14■□□□□ 0.97
VPS16Q9H269 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS16Q9H269 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.14■□□□□ 0.97
VPS16Q9H269 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.14■□□□□ 0.97
VPS16Q9H269 YBX1P10-201ENST00000444752 975 ntBASIC21.14■□□□□ 0.97
VPS16Q9H269 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS16Q9H269 PNMA6B-201ENST00000538162 1200 ntBASIC21.14■□□□□ 0.97
VPS16Q9H269 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.14■□□□□ 0.97
VPS16Q9H269 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.14■□□□□ 0.97
VPS16Q9H269 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS16Q9H269 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 HLA-B-256ENST00000639848 1089 ntBASIC21.14■□□□□ 0.97
VPS16Q9H269 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS16Q9H269 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS16Q9H269 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS16Q9H269 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS16Q9H269 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.13■□□□□ 0.97
VPS16Q9H269 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS16Q9H269 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 AC098934.4-201ENST00000564127 592 ntBASIC21.13■□□□□ 0.97
VPS16Q9H269 AC092666.2-201ENST00000613287 246 ntBASIC21.13■□□□□ 0.97
VPS16Q9H269 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS16Q9H269 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS16Q9H269 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
VPS16Q9H269 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VPS16Q9H269 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS16Q9H269 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VPS16Q9H269 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS16Q9H269 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
VPS16Q9H269 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS16Q9H269 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS16Q9H269 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS16Q9H269 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS16Q9H269 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms