Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 CCR12P-201ENST00000446203 998 ntBASIC19.99■□□□□ 0.79
RNF38Q9H0F5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF38Q9H0F5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 KRT18P35-201ENST00000510488 1269 ntBASIC19.98■□□□□ 0.79
RNF38Q9H0F5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.98■□□□□ 0.79
RNF38Q9H0F5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF38Q9H0F5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 HMGA1P5-201ENST00000412453 271 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 ATP5G1P1-201ENST00000448724 379 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AL353719.1-201ENST00000566847 864 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AC006011.2-201ENST00000621313 1158 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 AC125437.2-201ENST00000625180 2167 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 SDHAP1-207ENST00000440850 2000 ntBASIC19.97■□□□□ 0.79
RNF38Q9H0F5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF38Q9H0F5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 AC010653.2-201ENST00000623505 997 ntBASIC19.96■□□□□ 0.79
RNF38Q9H0F5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.96■□□□□ 0.79
RNF38Q9H0F5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF38Q9H0F5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 TSPY17P-201ENST00000450329 467 ntBASIC19.95■□□□□ 0.78
RNF38Q9H0F5 CA15P1-201ENST00000481698 905 ntBASIC19.95■□□□□ 0.78
RNF38Q9H0F5 DUX4L26-201ENST00000489078 1255 ntBASIC19.95■□□□□ 0.78
RNF38Q9H0F5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 AL138966.2-201ENST00000621997 464 ntBASIC19.95■□□□□ 0.78
RNF38Q9H0F5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF38Q9H0F5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms