Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 TFP1-202ENST00000475455 1573 ntBASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 NEFHP1-201ENST00000412845 2629 ntBASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 PNMA6B-201ENST00000538162 1200 ntBASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AC092368.3-202ENST00000574180 1591 ntBASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 AC093525.10-201ENST00000625130 1569 ntBASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXP3Q9BZS1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
FOXP3Q9BZS1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXP3Q9BZS1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms