Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 GPX1P1-201ENST00000388829 606 ntBASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 AC090192.1-201ENST00000517740 490 ntBASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 AC141586.3-201ENST00000562166 1838 ntBASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
THUMPD3Q9BV44 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 TEX21P-204ENST00000641479 1693 ntBASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.39■□□□□ 0.53
THUMPD3Q9BV44 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 SLC29A4P1-201ENST00000398760 971 ntBASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THUMPD3Q9BV44 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms