Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.83□□□□□ -0.04
SHANK2-AS3Q9BTD1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 FP475955.4-201ENST00000623131 1990 ntBASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 IRX1P1-201ENST00000438849 1838 ntBASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.82□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC093525.10-201ENST00000625130 1569 ntBASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC091874.3-201ENST00000512672 1195 ntBASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL121832.2-201ENST00000610979 668 ntBASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.81□□□□□ -0.04
SHANK2-AS3Q9BTD1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL031598.1-201ENST00000561511 1773 ntBASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 Z98044.1-201ENST00000632503 1764 ntBASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 CROCCP5-201ENST00000436658 830 ntBASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 AL137784.2-201ENST00000607332 1000 ntBASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 IKBKGP1-201ENST00000612193 1073 ntBASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHANK2-AS3Q9BTD1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms