Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 BID-214ENST00000617586 542 ntTSL 5 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 KRT8P20-201ENST00000423953 1409 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 AC006015.1-201ENST00000429970 570 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 CNN2P6-201ENST00000439038 900 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 RARRES2P4-201ENST00000514074 484 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 DUX4L16-201ENST00000555130 1264 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 AL031598.1-201ENST00000561511 1773 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 FZD10-202ENST00000539839 3282 ntBASIC17.65■□□□□ 0.42
COPS4Q9BT78 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS4Q9BT78 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COPS4Q9BT78 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPS4Q9BT78 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPS4Q9BT78 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 BICD1-207ENST00000551848 1962 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 MCRIP2P1-201ENST00000394346 511 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 AC069236.1-201ENST00000604339 616 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 AC008694.1-202ENST00000636953 945 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 TEX21P-204ENST00000641479 1693 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.64■□□□□ 0.41
COPS4Q9BT78 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 AC068338.2-201ENST00000563278 1430 ntBASIC17.64■□□□□ 0.41
COPS4Q9BT78 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPS4Q9BT78 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 AL354751.1-201ENST00000412768 1863 ntBASIC17.63■□□□□ 0.41
COPS4Q9BT78 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms