Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE1Q99829 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 IRX1P1-201ENST00000438849 1838 ntBASIC19.25■□□□□ 0.67
CPNE1Q99829 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.25■□□□□ 0.67
CPNE1Q99829 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.25■□□□□ 0.67
CPNE1Q99829 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE1Q99829 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE1Q99829 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPNE1Q99829 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE1Q99829 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CPNE1Q99829 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE1Q99829 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPNE1Q99829 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE1Q99829 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.24■□□□□ 0.67
CPNE1Q99829 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 AC083880.1-201ENST00000608266 535 ntBASIC19.24■□□□□ 0.67
CPNE1Q99829 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.24■□□□□ 0.67
CPNE1Q99829 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CPNE1Q99829 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE1Q99829 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE1Q99829 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 AC093525.10-201ENST00000625130 1569 ntBASIC19.23■□□□□ 0.67
CPNE1Q99829 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CPNE1Q99829 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE1Q99829 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CPNE1Q99829 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE1Q99829 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.23■□□□□ 0.67
CPNE1Q99829 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CPNE1Q99829 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE1Q99829 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE1Q99829 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE1Q99829 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE1Q99829 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPNE1Q99829 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.22■□□□□ 0.67
CPNE1Q99829 AL031598.1-201ENST00000561511 1773 ntBASIC19.22■□□□□ 0.67
CPNE1Q99829 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE1Q99829 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE1Q99829 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms