Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.68■□□□□ 0.42
TIMP4Q99727 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.68■□□□□ 0.42
TIMP4Q99727 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.68■□□□□ 0.42
TIMP4Q99727 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TIMP4Q99727 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP4Q99727 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP4Q99727 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP4Q99727 AL355075.4-201ENST00000554988 638 ntBASIC17.68■□□□□ 0.42
TIMP4Q99727 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TIMP4Q99727 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMP4Q99727 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TIMP4Q99727 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMP4Q99727 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TIMP4Q99727 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
TIMP4Q99727 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.67■□□□□ 0.42
TIMP4Q99727 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP4Q99727 NIFKP9-201ENST00000419265 221 ntBASIC17.67■□□□□ 0.42
TIMP4Q99727 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.67■□□□□ 0.42
TIMP4Q99727 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 KSR1P1-201ENST00000446298 240 ntBASIC17.67■□□□□ 0.42
TIMP4Q99727 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 KRT18P16-201ENST00000510337 1294 ntBASIC17.67■□□□□ 0.42
TIMP4Q99727 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMP4Q99727 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TIMP4Q99727 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.67■□□□□ 0.42
TIMP4Q99727 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMP4Q99727 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TIMP4Q99727 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMP4Q99727 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TIMP4Q99727 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 TUBB8P6-201ENST00000436895 1288 ntBASIC17.66■□□□□ 0.42
TIMP4Q99727 C1QL1P1-201ENST00000568105 661 ntBASIC17.66■□□□□ 0.42
TIMP4Q99727 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 CR392000.1-201ENST00000624770 1228 ntBASIC17.66■□□□□ 0.42
TIMP4Q99727 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TIMP4Q99727 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP4Q99727 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP4Q99727 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMP4Q99727 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP4Q99727 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TIMP4Q99727 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TIMP4Q99727 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMP4Q99727 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.65■□□□□ 0.42
TIMP4Q99727 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.65■□□□□ 0.42
TIMP4Q99727 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms