Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPENQ96T58 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.42■□□□□ 0.38
SPENQ96T58 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.42■□□□□ 0.38
SPENQ96T58 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SPENQ96T58 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
SPENQ96T58 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPENQ96T58 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.42■□□□□ 0.38
SPENQ96T58 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.42■□□□□ 0.38
SPENQ96T58 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.42■□□□□ 0.38
SPENQ96T58 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SPENQ96T58 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 TUBB8P6-201ENST00000436895 1288 ntBASIC17.41■□□□□ 0.38
SPENQ96T58 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.41■□□□□ 0.38
SPENQ96T58 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
SPENQ96T58 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
SPENQ96T58 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPENQ96T58 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
SPENQ96T58 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.41■□□□□ 0.38
SPENQ96T58 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.41■□□□□ 0.38
SPENQ96T58 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SPENQ96T58 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.4■□□□□ 0.38
SPENQ96T58 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPENQ96T58 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.4■□□□□ 0.38
SPENQ96T58 AC092597.1-201ENST00000487352 616 ntBASIC17.4■□□□□ 0.38
SPENQ96T58 RNA5SP419-201ENST00000515908 135 ntBASIC17.4■□□□□ 0.38
SPENQ96T58 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.4■□□□□ 0.38
SPENQ96T58 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.4■□□□□ 0.38
SPENQ96T58 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SPENQ96T58 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
SPENQ96T58 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SPENQ96T58 AP002414.4-201ENST00000589764 1148 ntBASIC17.4■□□□□ 0.38
SPENQ96T58 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPENQ96T58 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SPENQ96T58 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPENQ96T58 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.4■□□□□ 0.38
SPENQ96T58 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.4■□□□□ 0.38
SPENQ96T58 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SPENQ96T58 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 AP002383.4-201ENST00000442518 975 ntBASIC17.39■□□□□ 0.37
SPENQ96T58 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.39■□□□□ 0.37
SPENQ96T58 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPENQ96T58 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SPENQ96T58 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.39■□□□□ 0.37
SPENQ96T58 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SPENQ96T58 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPENQ96T58 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SPENQ96T58 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.39■□□□□ 0.37
SPENQ96T58 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.39■□□□□ 0.37
SPENQ96T58 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.39■□□□□ 0.37
SPENQ96T58 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.39■□□□□ 0.37
SPENQ96T58 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPENQ96T58 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.38■□□□□ 0.37
SPENQ96T58 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.38■□□□□ 0.37
SPENQ96T58 AL031432.5-201ENST00000641059 760 ntBASIC17.38■□□□□ 0.37
SPENQ96T58 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 AP005212.1-201ENST00000581547 1997 ntBASIC17.38■□□□□ 0.37
SPENQ96T58 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.38■□□□□ 0.37
SPENQ96T58 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.38■□□□□ 0.37
SPENQ96T58 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPENQ96T58 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.38■□□□□ 0.37
SPENQ96T58 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.38■□□□□ 0.37
SPENQ96T58 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPENQ96T58 LINC01311-201ENST00000565162 1445 ntBASIC17.37■□□□□ 0.37
SPENQ96T58 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SPENQ96T58 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms