Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCC1Q96S66 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.2■□□□□ 0.18
CLCC1Q96S66 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCC1Q96S66 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLCC1Q96S66 PCDHB18P-201ENST00000524813 2368 ntBASIC16.2■□□□□ 0.18
CLCC1Q96S66 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
CLCC1Q96S66 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 AL133373.2-201ENST00000623187 2828 ntBASIC16.19■□□□□ 0.18
CLCC1Q96S66 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 AC092666.2-201ENST00000613287 246 ntBASIC16.19■□□□□ 0.18
CLCC1Q96S66 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCC1Q96S66 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLCC1Q96S66 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 AC005332.7-201ENST00000614046 2005 ntBASIC16.18■□□□□ 0.18
CLCC1Q96S66 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 CDCA4P2-201ENST00000441182 718 ntBASIC16.18■□□□□ 0.18
CLCC1Q96S66 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 AC087633.2-202ENST00000565166 1439 ntBASIC16.18■□□□□ 0.18
CLCC1Q96S66 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLCC1Q96S66 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCC1Q96S66 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 AC125437.2-201ENST00000625180 2167 ntBASIC16.17■□□□□ 0.18
CLCC1Q96S66 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 MCRIP2P1-201ENST00000394346 511 ntBASIC16.17■□□□□ 0.18
CLCC1Q96S66 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 AC093787.1-201ENST00000450396 207 ntBASIC16.17■□□□□ 0.18
CLCC1Q96S66 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms