Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40CQ96S21 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.62■□□□□ 0.09
RAB40CQ96S21 AC087623.3-201ENST00000607047 1098 ntBASIC15.62■□□□□ 0.09
RAB40CQ96S21 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 AL354751.1-201ENST00000412768 1863 ntBASIC15.62■□□□□ 0.09
RAB40CQ96S21 AC018470.1-201ENST00000624790 3129 ntBASIC15.62■□□□□ 0.09
RAB40CQ96S21 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 ZNF815P-204ENST00000434898 1737 ntBASIC15.62■□□□□ 0.09
RAB40CQ96S21 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAB40CQ96S21 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAB40CQ96S21 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 AC007322.4-201ENST00000509611 723 ntBASIC15.61■□□□□ 0.09
RAB40CQ96S21 AC016405.3-201ENST00000607710 860 ntBASIC15.61■□□□□ 0.09
RAB40CQ96S21 AC010536.3-201ENST00000620306 533 ntBASIC15.61■□□□□ 0.09
RAB40CQ96S21 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB40CQ96S21 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB40CQ96S21 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 AC018553.1-201ENST00000616682 1458 ntBASIC15.6■□□□□ 0.09
RAB40CQ96S21 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 IRX1P1-201ENST00000438849 1838 ntBASIC15.6■□□□□ 0.09
RAB40CQ96S21 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 KRT18P68-201ENST00000392293 1000 ntBASIC15.6■□□□□ 0.09
RAB40CQ96S21 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 NOC2LP2-201ENST00000407594 1944 ntBASIC15.6■□□□□ 0.09
RAB40CQ96S21 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 NOC2LP1-202ENST00000452600 2235 ntBASIC15.6■□□□□ 0.09
RAB40CQ96S21 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 FP475955.4-201ENST00000623131 1990 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms