Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 AC136469.2-201ENST00000623944 1028 ntBASIC18.14■□□□□ 0.49
NR1H4Q96RI1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR1H4Q96RI1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 AL136116.3-201ENST00000402907 1138 ntBASIC18.13■□□□□ 0.49
NR1H4Q96RI1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 SMUG1P1-201ENST00000590640 811 ntBASIC18.13■□□□□ 0.49
NR1H4Q96RI1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NR1H4Q96RI1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 AC116050.2-201ENST00000612102 1779 ntBASIC18.12■□□□□ 0.49
NR1H4Q96RI1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 GNAS-203ENST00000306120 1878 ntBASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 AC011298.3-201ENST00000615796 283 ntBASIC18.12■□□□□ 0.49
NR1H4Q96RI1 RARRES2P11-201ENST00000635158 484 ntBASIC18.12■□□□□ 0.49
NR1H4Q96RI1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 AP001271.2-201ENST00000624018 1556 ntBASIC18.12■□□□□ 0.49
NR1H4Q96RI1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NR1H4Q96RI1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H4Q96RI1 TEX21P-204ENST00000641479 1693 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms