Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB3IPQ96QF0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 AC099398.1-201ENST00000567919 2776 ntBASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 AL512631.2-201ENST00000604634 923 ntBASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 AC009053.2-201ENST00000563701 2365 ntBASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 AC008764.6-201ENST00000595909 2069 ntBASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB3IPQ96QF0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 KRT8P17-201ENST00000453110 1448 ntBASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB3IPQ96QF0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RAB3IPQ96QF0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB3IPQ96QF0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 AC007322.3-201ENST00000426526 701 ntBASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 AC131212.1-201ENST00000613771 668 ntBASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 AC106820.2-201ENST00000563775 3264 ntBASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB3IPQ96QF0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 ESPNP-201ENST00000270691 2015 ntBASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB3IPQ96QF0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms