Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 TEX21P-204ENST00000641479 1693 ntBASIC16.04■□□□□ 0.16
GAFA1Q96PS6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 KRT8P41-201ENST00000533985 1514 ntBASIC16.04■□□□□ 0.16
GAFA1Q96PS6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GAFA1Q96PS6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GAFA1Q96PS6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 RCC2P6-201ENST00000526625 1557 ntBASIC16.02■□□□□ 0.16
GAFA1Q96PS6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.02■□□□□ 0.16
GAFA1Q96PS6 AC066615.1-201ENST00000640911 628 ntBASIC16.02■□□□□ 0.16
GAFA1Q96PS6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
GAFA1Q96PS6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 AC004951.3-201ENST00000418645 1148 ntBASIC16.01■□□□□ 0.15
GAFA1Q96PS6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 AC093827.2-201ENST00000512654 315 ntBASIC16.01■□□□□ 0.15
GAFA1Q96PS6 NUDT16P1-203ENST00000513809 620 ntBASIC16.01■□□□□ 0.15
GAFA1Q96PS6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
GAFA1Q96PS6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms