Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 RNA5SP419-201ENST00000515908 135 ntBASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
CNTNAP3BQ96NU0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP3BQ96NU0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.39■□□□□ 0.54
CNTNAP3BQ96NU0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AP003041.3-201ENST00000527151 707 ntBASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AC064862.7-201ENST00000604520 867 ntBASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.39■□□□□ 0.53
CNTNAP3BQ96NU0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 RNPS1P1-201ENST00000507437 918 ntBASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 AL353801.3-201ENST00000609898 542 ntBASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP3BQ96NU0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms