Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.82■□□□□ 0.76
C9orf72Q96LT7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 ITM2C-210ENST00000620962 501 ntBASIC19.81■□□□□ 0.76
C9orf72Q96LT7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 AC141586.3-201ENST00000562166 1838 ntBASIC19.81■□□□□ 0.76
C9orf72Q96LT7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf72Q96LT7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf72Q96LT7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 KRT18P29-201ENST00000397031 1267 ntBASIC19.79■□□□□ 0.76
C9orf72Q96LT7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf72Q96LT7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
C9orf72Q96LT7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms