Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 AL049812.1-201ENST00000432563 2267 ntBASIC18.83■□□□□ 0.61
PDLIM5Q96HC4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 AC128676.1-201ENST00000454392 318 ntBASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM5Q96HC4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDLIM5Q96HC4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 AL445675.2-201ENST00000620291 557 ntBASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 AC006333.2-201ENST00000607957 2099 ntBASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
PDLIM5Q96HC4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 KRT8P41-201ENST00000533985 1514 ntBASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms