Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDCA5Q96FF9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 CHCHD2P8-201ENST00000429873 447 ntBASIC22.58■■□□□ 1.21
CDCA5Q96FF9 AC079781.3-201ENST00000449110 356 ntBASIC22.58■■□□□ 1.21
CDCA5Q96FF9 AL160237.2-201ENST00000556165 472 ntBASIC22.58■■□□□ 1.21
CDCA5Q96FF9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.58■■□□□ 1.21
CDCA5Q96FF9 AL162741.1-201ENST00000565563 1558 ntBASIC22.58■■□□□ 1.2
CDCA5Q96FF9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDCA5Q96FF9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDCA5Q96FF9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.57■■□□□ 1.2
CDCA5Q96FF9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDCA5Q96FF9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 AC093525.10-201ENST00000625130 1569 ntBASIC22.56■■□□□ 1.2
CDCA5Q96FF9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 KRT18P1-202ENST00000452408 1331 ntBASIC22.56■■□□□ 1.2
CDCA5Q96FF9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.56■■□□□ 1.2
CDCA5Q96FF9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 AC079602.3-201ENST00000623931 403 ntBASIC22.55■■□□□ 1.2
CDCA5Q96FF9 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.55■■□□□ 1.2
CDCA5Q96FF9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA5Q96FF9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 AP000593.1-201ENST00000393668 712 ntBASIC22.54■■□□□ 1.2
CDCA5Q96FF9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.54■■□□□ 1.2
CDCA5Q96FF9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms