Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 RCC2P6-201ENST00000526625 1557 ntBASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTHRC1Q96CG8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 MIR718-201ENST00000390190 70 ntBASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 MESTP1-201ENST00000404287 994 ntBASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 TSPY23P-201ENST00000440136 739 ntBASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 AC091390.4-202ENST00000476426 537 ntBASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 AC130371.2-201ENST00000619443 611 ntBASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CTHRC1Q96CG8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AC004951.3-201ENST00000418645 1148 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AC011506.1-201ENST00000474329 610 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AC116562.2-201ENST00000507042 360 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 NUDT16P1-203ENST00000513809 620 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 IRX1P1-201ENST00000438849 1838 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 AL161938.1-201ENST00000569833 2180 ntBASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTHRC1Q96CG8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTHRC1Q96CG8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms