Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.75■■□□□ 1.07
VTI1AQ96AJ9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
VTI1AQ96AJ9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AC140113.3-201ENST00000605663 199 ntBASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AC010653.2-201ENST00000623505 997 ntBASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AC141257.4-201ENST00000634557 245 ntBASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AC136944.6-201ENST00000634818 245 ntBASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 AC096733.2-201ENST00000609937 1394 ntBASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VTI1AQ96AJ9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 AC011558.1-201ENST00000623459 338 ntBASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 AP000550.4-202ENST00000639755 178 ntBASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VTI1AQ96AJ9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 TCF3P1-201ENST00000423021 1937 ntBASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 MYC-208ENST00000641036 567 ntBASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 SMG8-203ENST00000578922 2178 ntBASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.71■■□□□ 1.07
VTI1AQ96AJ9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VTI1AQ96AJ9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 TSPY17P-201ENST00000450329 467 ntBASIC21.7■■□□□ 1.06
VTI1AQ96AJ9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms